RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 NME8Q8N427 588 aa9.73□□□□□ -0.85
NECAP1-207ENST00000544891 DPH5Q9H2P9 285 aa9.73□□□□□ -0.85
NECAP1-207ENST00000544891 FEM1BQ9UK73 627 aa9.73□□□□□ -0.85
NECAP1-207ENST00000544891 TJP1Q07157 1748 aa9.73□□□□□ -0.85
NECAP1-207ENST00000544891 ZBTB5O15062 677 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 WDR46O15213 610 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 YWHAGP61981 247 aaKnown RBP eCLIP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 CAV1Q03135 178 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 TFDP2Q14188 446 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 SGO2Q562F6 1265 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 DALRD3Q5D0E6 543 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 SDCCAG3Q96C92 435 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 PAGE5Q96GU1 130 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 ANKRD36CQ5JPF3 1778 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 K7ERI5 159 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 CYP27B1O15528 508 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 NDUFA10O95299 355 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 GSTA1P08263 222 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 GSTA2P09210 222 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 NR1H3Q13133 447 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 KYAT1Q16773 422 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 ARL13BQ3SXY8 428 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 TMCO4Q5TGY1 634 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 RESP18Q5W5W9 173 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 PDXDC2PQ6P474 469 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 CCDC197Q8NCU1 140 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 GCNT4Q9P109 453 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 CPSF3Q9UKF6 684 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 AKT3Q9Y243 479 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 PLCG1P19174 1290 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 ANXA13P27216 316 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 SUSD4Q5VX71 490 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 ENOSF1Q7L5Y1 443 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 RFX6Q8HWS3 928 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 C2orf40Q9H1Z8 148 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 TOPORSQ9NS56 1045 aaPredicted RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 ORC4O43929 436 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 AP3M2P53677 418 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 CLNS1AP54105 237 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 STX1BP61266 288 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 RBBP5Q15291 538 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 HSP90AA5PQ58FG0 334 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 RNF169Q8NCN4 708 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 TRIM56Q9BRZ2 755 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 ISCA1Q9BUE6 129 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 EFHD1Q9BUP0 239 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 TIPINQ9BVW5 301 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 SLC38A10Q9HBR0 1119 aa9.72□□□□□ -0.85
NECAP1-207ENST00000544891 CPSF2Q9P2I0 782 aaKnown RBP9.72□□□□□ -0.85
NECAP1-207ENST00000544891 PNPLA7Q6ZV29 1317 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 WDR64B1ANS9 1081 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 HEXIM1O94992 359 aaKnown RBP9.71□□□□□ -0.85
NECAP1-207ENST00000544891 TTC4O95801 387 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 ERCC3P19447 782 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 RBL2Q08999 1139 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 FAM149B1Q96BN6 582 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 RPF1Q9H9Y2 349 aaKnown RBP9.71□□□□□ -0.85
NECAP1-207ENST00000544891 PIH1D3Q9NQM4 214 aaKnown RBP9.71□□□□□ -0.85
NECAP1-207ENST00000544891 THEGQ9P2T0 379 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 BAIAP2L1Q9UHR4 511 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 LTBP4Q8N2S1 1624 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 RREB1Q92766 1687 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 ESYT2A0FGR8 921 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 CIITAP33076 1130 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 SGMS1Q86VZ5 419 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 PDIK1LQ8N165 341 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 C17orf53Q8N3J3 647 aaPredicted RBP9.71□□□□□ -0.85
NECAP1-207ENST00000544891 DHX38Q92620 1227 aaKnown RBP9.71□□□□□ -0.85
NECAP1-207ENST00000544891 RBM41Q96IZ5 413 aaKnown RBP9.71□□□□□ -0.85
NECAP1-207ENST00000544891 SCYL1Q96KG9 808 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 MAD1L1Q9Y6D9 718 aa9.71□□□□□ -0.85
NECAP1-207ENST00000544891 CPP00450 1065 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 CYP2E1P05181 493 aaPredicted RBP9.71□□□□□ -0.86
NECAP1-207ENST00000544891 XPAP23025 273 aaPredicted RBP9.71□□□□□ -0.86
NECAP1-207ENST00000544891 RWDD2BP57060 319 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 KCTD1Q719H9 257 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 NDUFAF2Q8N183 169 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 HERC5Q9UII4 1024 aaKnown RBP9.71□□□□□ -0.86
NECAP1-207ENST00000544891 FOXP2O15409 715 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 PRPSAP2O60256 369 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 MSH2P43246 934 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 NR5A1Q13285 461 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 TCP11X2Q5H9J9 407 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 ALKBH5Q6P6C2 394 aaKnown RBP9.71□□□□□ -0.86
NECAP1-207ENST00000544891 GBP7Q8N8V2 638 aaPredicted RBP9.71□□□□□ -0.86
NECAP1-207ENST00000544891 TMEM35BQ8NCS4 154 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 TTC25Q96NG3 672 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 ZNF341Q9BYN7 854 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 CEP72Q9P209 647 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 EPS15L1Q9UBC2 864 aa9.71□□□□□ -0.86
NECAP1-207ENST00000544891 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
NECAP1-207ENST00000544891 PKP1Q13835 747 aa9.7□□□□□ -0.86
NECAP1-207ENST00000544891 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
NECAP1-207ENST00000544891 MB21D1Q8N884 522 aa9.7□□□□□ -0.86
NECAP1-207ENST00000544891 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms