RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TRPM1Q7Z4N2 1603 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 MED7O43513 233 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 ADGRF4Q8IZF3 695 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 DNAJC12Q9UKB3 198 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 SLC16A4O15374 487 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 BAG2O95816 211 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 ARL4AP40617 200 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 TMED2Q15363 201 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 FAN1Q9Y2M0 1017 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 IQGAP3Q86VI3 1631 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 TDP2O95551 362 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 PRELPP51888 382 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 TOGARAM2Q6ZUX3 1019 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 FMR1NBQ8N0W7 255 aaPredicted RBP13.82□□□□□ -0.2
CHD4-211ENST00000544484 RYBPQ8N488 228 aaPredicted RBP13.82□□□□□ -0.2
CHD4-211ENST00000544484 GUCY1A2P33402 732 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 GARSP41250 739 aaKnown RBP13.82□□□□□ -0.2
CHD4-211ENST00000544484 GRM4Q14833 912 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 CATSPER4Q7RTX7 472 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 ZWILCHQ9H900 591 aa13.82□□□□□ -0.2
CHD4-211ENST00000544484 KIF28PB7ZC32 967 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 FOXN1O15353 648 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 AKR1B1P15121 316 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 SESN3P58005 492 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 RC3H1Q5TC82 1133 aaKnown RBP13.81□□□□□ -0.2
CHD4-211ENST00000544484 HDAC11Q96DB2 347 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 CLTAP09496 248 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 SIX6OS1Q8N1H7 587 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 RNF146Q9NTX7 359 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 PRPSAP2O60256 369 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 CPP00450 1065 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 RBBP5Q15291 538 aaKnown RBP13.81□□□□□ -0.2
CHD4-211ENST00000544484 OR6B3Q8NGW1 331 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 ZBTB24O43167 697 aaPredicted RBP13.81□□□□□ -0.2
CHD4-211ENST00000544484 STXBP2Q15833 593 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 PASD1Q8IV76 773 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 RAD54LQ92698 747 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 VCXQ9H320 206 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 NR3C1P04150 777 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 C10orf76Q5T2E6 689 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 FAM81BQ96LP2 452 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 LRRC7Q96NW7 1537 aa13.81□□□□□ -0.2
CHD4-211ENST00000544484 COASYQ13057 564 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 PBKQ96KB5 322 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 NGRNQ9NPE2 291 aaKnown RBP13.8□□□□□ -0.2
CHD4-211ENST00000544484 SRGAP2O75044 1071 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 CHRNA5P30532 468 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 MYLK4Q86YV6 388 aaPredicted RBP13.8□□□□□ -0.2
CHD4-211ENST00000544484 BARHL2Q9NY43 387 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 NRKQ7Z2Y5 1582 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 APBA1Q02410 837 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 ALX1Q15699 326 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 ARHGEF18Q6ZSZ5 1173 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
CHD4-211ENST00000544484 CFAP61Q8NHU2 1237 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 FEM1BQ9UK73 627 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 CLDN3O15551 220 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 JAK3P52333 1124 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 BBS9Q3SYG4 887 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 HSPH1Q92598 858 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 FAM213AQ9BRX8 229 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 MYL3P08590 195 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 ADRA2BP18089 450 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 IFT122Q9HBG6 1241 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 WDR64B1ANS9 1081 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 IL9RQ01113 521 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 HOXC10Q9NYD6 342 aa13.8□□□□□ -0.2
CHD4-211ENST00000544484 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 FGGP02679 453 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 MSH2P43246 934 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 IFT88Q13099 833 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 ALCAMQ13740 583 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 RCN2Q14257 317 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 SLFN12LQ6IEE8 588 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
CHD4-211ENST00000544484 LGALS16A8MUM7 142 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 PFDN6O15212 129 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 GPC4O75487 556 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 DR1Q01658 176 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 XXYLT1Q8NBI6 393 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
CHD4-211ENST00000544484 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 CASQ2O14958 399 aaPredicted RBP13.79□□□□□ -0.2
CHD4-211ENST00000544484 PALMO75781 387 aa13.79□□□□□ -0.2
CHD4-211ENST00000544484 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms