RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 RETREG2Q8NC44 543 aa17.33■□□□□ 0.37
SNRNP70-203ENST00000544278 IFT81Q8WYA0 676 aa17.33■□□□□ 0.37
SNRNP70-203ENST00000544278 ARMCX3Q9UH62 379 aaPredicted RBP17.33■□□□□ 0.37
SNRNP70-203ENST00000544278 GTF2A1P52655 376 aaPredicted RBP17.33■□□□□ 0.36
SNRNP70-203ENST00000544278 KLHL7Q8IXQ5 586 aa17.33■□□□□ 0.36
SNRNP70-203ENST00000544278 TLR10Q9BXR5 811 aa17.33■□□□□ 0.36
SNRNP70-203ENST00000544278 EHD4Q9H223 541 aa17.33■□□□□ 0.36
SNRNP70-203ENST00000544278 SNX12Q9UMY4 172 aa17.33■□□□□ 0.36
SNRNP70-203ENST00000544278 ARHGAP44Q17R89 818 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 SLC9C1Q4G0N8 1177 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 PPP1R18Q6NYC8 613 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 MKL1Q969V6 931 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 TMOD2Q9NZR1 351 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 MYO1AQ9UBC5 1043 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 NFIBO00712 420 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 MAP2K7O14733 419 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 GFPT2O94808 682 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 FAM13AO94988 1023 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 FGFR1OPO95684 399 aaKnown RBP17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 ABCB4P21439 1286 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 USP11P51784 963 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 HAUS3Q68CZ6 603 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 ZNF70Q9UC06 446 aaPredicted RBP17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 USP20Q9Y2K6 914 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 COL11A2P13942 1736 aaPredicted RBP17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 MYO1CO00159 1063 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 INPP5BP32019 993 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 MKRN4PQ13434 485 aaPredicted RBP17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 GRIPAP1Q4V328 841 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 NAA35Q5VZE5 725 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
SNRNP70-203ENST00000544278 GAS7O60861 476 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 NR3C1P04150 777 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 GUCY2FP51841 1108 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 KNOP1Q1ED39 458 aaKnown RBP17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 KLHDC7AQ5VTJ3 777 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 RINT1Q6NUQ1 792 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 ZNF571Q7Z3V5 609 aaPredicted RBP17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 SPATA4Q8NEY3 305 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 PEX10O60683 326 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 RPA1P27694 616 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 SREBF1P36956 1147 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 SOX10P56693 466 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 ZSCAN26Q16670 478 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 ACP6Q9NPH0 428 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 SERPINA10Q9UK55 444 aa17.31■□□□□ 0.36
SNRNP70-203ENST00000544278 SLITRK3O94933 977 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 ALAS1P13196 640 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 PRKG1Q13976 671 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 ASIC2Q16515 512 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 SLFN12Q8IYM2 578 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 WDR11Q9BZH6 1224 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 COL20A1Q9P218 1284 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 ERMNQ8TAM6 284 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 ZNF341Q9BYN7 854 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 GPRC5CQ9NQ84 441 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 GCNT4Q9P109 453 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 ASTN1O14525 1302 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 MYCLP12524 364 aaPredicted RBP17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 EIF2AK2P19525 551 aaKnown RBP17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 GGCXP38435 758 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 SLC20A2Q08357 652 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 PSMD2Q13200 908 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 EXOC3L4Q17RC7 722 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 SYT2Q8N9I0 419 aaPredicted RBP17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 TRIM58Q8NG06 486 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 ZNF577Q9BSK1 485 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 SELENOOQ9BVL4 669 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 AP1M1Q9BXS5 423 aa17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 RAVER2Q9HCJ3 691 aaKnown RBP17.3■□□□□ 0.36
SNRNP70-203ENST00000544278 IGLV3-22A0A075B6J6 115 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 A0A1W2PQJ5 194 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 GOLGA8IPA6NC78 632 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 GOLGA8JA6NMD2 632 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 UCHL3P15374 230 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 COPB2P35606 906 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 LDHDQ86WU2 507 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 CRYGNQ8WXF5 182 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 UNC45AQ9H3U1 944 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 JRKLQ9Y4A0 524 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 TELO2Q9Y4R8 837 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 CALCAP01258 141 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 ASTE1Q2TB18 679 aaPredicted RBP17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 HSP90B2PQ58FF3 399 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 ODR4Q5SWX8 454 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 DLK2Q6UY11 383 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 TEX2Q8IWB9 1127 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 KIFC3Q9BVG8 833 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 FAM204AQ9H8W3 233 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 CEP72Q9P209 647 aa17.29■□□□□ 0.36
SNRNP70-203ENST00000544278 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
SNRNP70-203ENST00000544278 TGFB1I1O43294 461 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms