RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 MICAL3Q7RTP6 2002 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 FOSL2P15408 326 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 GRIN2CQ14957 1233 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 ZNF484Q5JVG2 852 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 NEK8Q86SG6 692 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 NME8Q8N427 588 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 RDM1Q8NG50 284 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 FAM167AQ96KS9 214 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 UPF2Q9HAU5 1272 aaKnown RBP26.29■■□□□ 1.8
CHFR-222ENST00000544093 CEP131Q9UPN4 1083 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 WDR81Q562E7 1941 aa26.29■■□□□ 1.8
CHFR-222ENST00000544093 M0QZ92 97 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 AMHP03971 560 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 FDPSP14324 419 aaKnown RBP26.28■■□□□ 1.8
CHFR-222ENST00000544093 RBM25P49756 843 aaKnown RBP26.28■■□□□ 1.8
CHFR-222ENST00000544093 TRIM29Q14134 588 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 INF2Q27J81 1249 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 PPP4R3AQ6IN85 833 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 CKAP2LQ8IYA6 745 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 DNAJB3Q8WWF6 145 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 MYLIPQ8WY64 445 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 ZSCAN31Q96LW9 406 aaPredicted RBP26.28■■□□□ 1.8
CHFR-222ENST00000544093 GAS2L1Q99501 681 aaPredicted RBP26.28■■□□□ 1.8
CHFR-222ENST00000544093 DISC1Q9NRI5 854 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 DDX25Q9UHL0 483 aaKnown RBP26.28■■□□□ 1.8
CHFR-222ENST00000544093 MYO9BQ13459 2157 aa26.28■■□□□ 1.8
CHFR-222ENST00000544093 PTPRSQ13332 1948 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 SMIM35A0A1B0GVV1 85 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 TLL1O43897 1013 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 TDP2O95551 362 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 CHRNA1P02708 482 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 KRT2P35908 639 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 MTHFD1LQ6UB35 978 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 FAM43BQ6ZT52 329 aaPredicted RBP26.27■■□□□ 1.8
CHFR-222ENST00000544093 USP38Q8NB14 1042 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 UIMC1Q96RL1 719 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 LLPHQ9BRT6 129 aaKnown RBP26.27■■□□□ 1.8
CHFR-222ENST00000544093 ZBED2Q9BTP6 218 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 IFIH1Q9BYX4 1025 aaKnown RBP26.27■■□□□ 1.8
CHFR-222ENST00000544093 SQORQ9Y6N5 450 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 IGSF9BQ9UPX0 1349 aa26.27■■□□□ 1.8
CHFR-222ENST00000544093 PSMD10O75832 226 aa26.26■■□□□ 1.79
CHFR-222ENST00000544093 CA3P07451 260 aa26.26■■□□□ 1.79
CHFR-222ENST00000544093 MRPS6P82932 125 aaKnown RBP26.26■■□□□ 1.79
CHFR-222ENST00000544093 MGAT3Q09327 533 aa26.26■■□□□ 1.79
CHFR-222ENST00000544093 LETM2Q2VYF4 491 aa26.26■■□□□ 1.79
CHFR-222ENST00000544093 SH2B1Q9NRF2 756 aaPredicted RBP26.26■■□□□ 1.79
CHFR-222ENST00000544093 GABBR1Q9UBS5 961 aa26.26■■□□□ 1.79
CHFR-222ENST00000544093 GJB5O95377 273 aa26.25■■□□□ 1.79
CHFR-222ENST00000544093 DEFB103AP81534 67 aa26.25■■□□□ 1.79
CHFR-222ENST00000544093 MKRN4PQ13434 485 aaPredicted RBP26.25■■□□□ 1.79
CHFR-222ENST00000544093 PIK3AP1Q6ZUJ8 805 aa26.25■■□□□ 1.79
CHFR-222ENST00000544093 ETNPPLQ8TBG4 499 aa26.25■■□□□ 1.79
CHFR-222ENST00000544093 FAM20AQ96MK3 541 aa26.25■■□□□ 1.79
CHFR-222ENST00000544093 FAM49AQ9H0Q0 323 aaPredicted RBP26.25■■□□□ 1.79
CHFR-222ENST00000544093 GJB4Q9NTQ9 266 aa26.25■■□□□ 1.79
CHFR-222ENST00000544093 SIP14410 1827 aa26.25■■□□□ 1.79
CHFR-222ENST00000544093 CHD7Q9P2D1 2997 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 MYOGP15173 224 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 KLRC1P26715 233 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 TCTN1Q2MV58 587 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 TRAPPC12Q8WVT3 735 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 RAD9AQ99638 391 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 KIF2CQ99661 725 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 NRBP2Q9NSY0 501 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 CDY2AQ9Y6F7 541 aa26.24■■□□□ 1.79
CHFR-222ENST00000544093 KDM3AQ9Y4C1 1321 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 TBX3O15119 743 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 JAK2O60674 1132 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 MMP1P03956 469 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 ATP4AP20648 1035 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 RABEP1Q15276 862 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 FBXO47Q5MNV8 452 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 TSHZ1Q6ZSZ6 1077 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 MAFAQ8NHW3 353 aaPredicted RBP26.23■■□□□ 1.79
CHFR-222ENST00000544093 OXER1Q8TDS5 423 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 UNC45AQ9H3U1 944 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 TRPV2Q9Y5S1 764 aa26.23■■□□□ 1.79
CHFR-222ENST00000544093 MAGEB2O15479 319 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 CHMP2AO43633 222 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 CCNT1O60563 726 aaKnown RBP26.22■■□□□ 1.79
CHFR-222ENST00000544093 GHRP10912 638 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 LPIN1Q14693 890 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 B3GNT9Q6UX72 402 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 MIER3Q7Z3K6 550 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 ZNF710Q8N1W2 664 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 PRDM12Q9H4Q4 367 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 INSL6Q9Y581 213 aa26.22■■□□□ 1.79
CHFR-222ENST00000544093 ZBTB42B2RXF5 422 aa26.21■■□□□ 1.79
CHFR-222ENST00000544093 OATP04181 439 aa26.21■■□□□ 1.79
CHFR-222ENST00000544093 HMGN5P82970 282 aaKnown RBP26.21■■□□□ 1.79
CHFR-222ENST00000544093 SAFBQ15424 915 aaKnown RBP eCLIP26.21■■□□□ 1.79
CHFR-222ENST00000544093 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.21■■□□□ 1.79
CHFR-222ENST00000544093 MYOCDQ8IZQ8 938 aa26.21■■□□□ 1.79
CHFR-222ENST00000544093 CELF4Q9BZC1 486 aaKnown RBP26.21■■□□□ 1.79
CHFR-222ENST00000544093 KCNMB3Q9NPA1 279 aa26.21■■□□□ 1.79
CHFR-222ENST00000544093 EVPLQ92817 2033 aa26.21■■□□□ 1.79
CHFR-222ENST00000544093 SLC37A4O43826 429 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 ST18O60284 1047 aa26.2■■□□□ 1.78
CHFR-222ENST00000544093 ST3GAL1Q11201 340 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms