RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 EPN1Q9Y6I3 576 aaPredicted RBP9.63□□□□□ -0.87
VPS13D-212ENST00000543766 FAM135BQ49AJ0 1406 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ZBED4O75132 1171 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 BAIAP3O94812 1187 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 HIBCHQ6NVY1 386 aaPredicted RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 GALNT7Q86SF2 657 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ALDH16A1Q8IZ83 802 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ABTB2Q8N961 1025 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 IPMKQ8NFU5 416 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 TCF12Q99081 682 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 FAM129AQ9BZQ8 928 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 FAM114A2Q9NRY5 505 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 NRXN3Q9Y4C0 1643 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 CAPN14A8MX76 684 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 PDHBP11177 359 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 MZF1P28698 734 aaPredicted RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 IGHMBP2P38935 993 aaKnown RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ASPHQ12797 758 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 CYTH1Q15438 398 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 MAP7D3Q8IWC1 876 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 GALNT15Q8N3T1 639 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ERP44Q9BS26 406 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 KCTD10Q9H3F6 313 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 KANSL2Q9H9L4 492 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 TCF7L2Q9NQB0 619 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 HMGXB4Q9UGU5 601 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 DPP7Q9UHL4 492 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 PNMA3Q9UL41 463 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 MYH15Q9Y2K3 1946 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 VPS37CA5D8V6 355 aaPredicted RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 BECN2A8MW95 431 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 INO80B-WBP1J3KQ70 363 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 TOR1BO14657 336 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 SKIP12755 728 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ALAS1P13196 640 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 SLC8A1P32418 973 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 PDE1CQ14123 709 aaPredicted RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 CCDC153Q494R4 210 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 YME1L1Q96TA2 773 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ZBED2Q9BTP6 218 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 DCTPP1Q9H773 170 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 ZC3H7BQ9UGR2 993 aaKnown RBP9.62□□□□□ -0.87
VPS13D-212ENST00000543766 PHF24Q9UPV7 400 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 KIF20BQ96Q89 1820 aa9.62□□□□□ -0.87
VPS13D-212ENST00000543766 PRPF3O43395 683 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 SIN3BO75182 1162 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 VAMP4O75379 141 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 SDSP20132 328 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 BTF3P20290 206 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CCR3P51677 355 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 USP46P62068 366 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 OLFML2BQ68BL8 750 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 ANKRD13CQ8N6S4 541 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 TDRD1Q9BXT4 1180 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 DNAJC18Q9H819 358 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 NTN4Q9HB63 628 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 FAM184BQ9ULE4 1060 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CRYBG1Q9Y4K1 1723 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 HNRNPRO43390 633 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CAPN1P07384 714 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 KRT7P08729 469 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 PYGMP11217 842 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CD9P21926 228 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 OLFM4Q6UX06 510 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CCDC81Q6ZN84 652 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 MIER3Q7Z3K6 550 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 PBXIP1Q96AQ6 731 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CFAP57Q96MR6 1250 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CAPN11Q9UMQ6 739 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 PCDHGB7Q9Y5F8 929 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 HEY1Q9Y5J3 304 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 SSH2Q76I76 1423 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CLASP2O75122 1294 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 ATP2C2O75185 946 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 PLIN5Q00G26 463 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 SEPT6Q14141 434 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 BZW1Q7L1Q6 419 aaKnown RBP9.61□□□□□ -0.87
VPS13D-212ENST00000543766 CPLX4Q7Z7G2 160 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 SLF1Q9BQI6 1058 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 SNX6Q9UNH7 406 aa9.61□□□□□ -0.87
VPS13D-212ENST00000543766 TBC1D12O60347 775 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 LRPAP1P30533 357 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 KIF5AQ12840 1032 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 ARHGAP11AQ6P4F7 1023 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 ZER1Q7Z7L7 766 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 IRGQQ8WZA9 623 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 RMDN1Q96DB5 314 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 L3MBTL3Q96JM7 780 aaPredicted RBP9.6□□□□□ -0.87
VPS13D-212ENST00000543766 KATNAL1Q9BW62 490 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 ATP6V0A4Q9HBG4 840 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 CBX8Q9HC52 389 aa9.6□□□□□ -0.87
VPS13D-212ENST00000543766 NEK6Q9HC98 313 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms