RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 KRT80Q6KB66 452 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 SYT2Q8N9I0 419 aaPredicted RBP14.1□□□□□ -0.15
TNC-212ENST00000542877 LCMT1Q9UIC8 334 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 NUB1Q9Y5A7 615 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 ZFYVE16Q7Z3T8 1539 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 MBD5Q9P267 1494 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 CYP2D7A0A087X1C5 515 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 MECOMQ03112 1051 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 OR6B2Q6IFH4 312 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 SRRM1Q8IYB3 904 aaKnown RBP14.1□□□□□ -0.15
TNC-212ENST00000542877 ATP6V1E2Q96A05 226 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 DNAJC12Q9UKB3 198 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 WDR91A4D1P6 747 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 CXorf38Q8TB03 319 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 DEPDC1BQ8WUY9 529 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 TRIM55Q9BYV6 548 aa14.1□□□□□ -0.15
TNC-212ENST00000542877 XAB2Q9HCS7 855 aaKnown RBP14.1□□□□□ -0.15
TNC-212ENST00000542877 USP17L3A6NCW0 530 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 USP17L4A6NCW7 530 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 SRGAP2O75044 1071 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 APBA3O96018 575 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 APOEP02649 317 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 CASP2P42575 452 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 CDK8P49336 464 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 E2F4Q16254 413 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 PFKFB3Q16875 520 aaPredicted RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 CCDC144BQ3MJ40 725 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 NUDCD1Q96RS6 583 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 BHMT2Q9H2M3 363 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 GINM1Q9NU53 330 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 SNX24Q9Y343 169 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 EFCAB6Q5THR3 1501 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 ZBED1O96006 694 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 DEUP1Q05D60 604 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 IQCB1Q15051 598 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 SLFN12LQ6IEE8 588 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 RNF207Q6ZRF8 634 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 BZW1Q7L1Q6 419 aaKnown RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 CRLF3Q8IUI8 442 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 MAML1Q92585 1016 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 CFAP36Q96G28 342 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 CCDC138Q96M89 665 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 TMEM60Q9H2L4 133 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 PI4KBQ9UBF8 816 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 NXF1Q9UBU9 619 aaKnown RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 ADGRG1Q9Y653 693 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 LRRC53A6NM62 1247 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 PSAPP07602 524 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 MCAMP43121 646 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 ORC2Q13416 577 aaPredicted RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 SPOPLQ6IQ16 392 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 FAM160B2Q86V87 743 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 ST13P4Q8IZP2 240 aaPredicted RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 AKT3Q9Y243 479 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 TADA3O75528 432 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 TRPA1O75762 1119 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 GDF11O95390 407 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 NCF2P19878 526 aaPredicted RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 INPP1P49441 399 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 POLE2P56282 527 aa14.09□□□□□ -0.15
TNC-212ENST00000542877 RBM41Q96IZ5 413 aaKnown RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 MORC2Q9Y6X9 1032 aaPredicted RBP14.09□□□□□ -0.15
TNC-212ENST00000542877 IL1RL1Q01638 556 aa14.08□□□□□ -0.15
TNC-212ENST00000542877 MYO1EQ12965 1108 aa14.08□□□□□ -0.15
TNC-212ENST00000542877 TBC1D10BQ4KMP7 808 aaPredicted RBP14.08□□□□□ -0.15
TNC-212ENST00000542877 KRT39Q6A163 491 aa14.08□□□□□ -0.15
TNC-212ENST00000542877 TTLL11Q8NHH1 800 aa14.08□□□□□ -0.15
TNC-212ENST00000542877 CENPKQ9BS16 269 aa14.08□□□□□ -0.15
TNC-212ENST00000542877 MRPL46Q9H2W6 279 aaKnown RBP14.08□□□□□ -0.15
TNC-212ENST00000542877 ARL4CP56559 192 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 RSRC2Q7L4I2 434 aaKnown RBP14.08□□□□□ -0.16
TNC-212ENST00000542877 DACT3Q96B18 629 aaPredicted RBP14.08□□□□□ -0.16
TNC-212ENST00000542877 CCDC124Q96CT7 223 aaKnown RBP14.08□□□□□ -0.16
TNC-212ENST00000542877 SAYSD1Q9NPB0 183 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 PRCPP42785 496 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 BIRC2Q13490 618 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 FAM96AQ9H5X1 160 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 GMNCA6NCL1 334 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 TRIM49BA6NDI0 452 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 GPC5P78333 572 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 ERICH1Q86X53 443 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 WDR75Q8IWA0 830 aaKnown RBP14.08□□□□□ -0.16
TNC-212ENST00000542877 SKA2Q8WVK7 121 aaPredicted RBP14.08□□□□□ -0.16
TNC-212ENST00000542877 TTC25Q96NG3 672 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 OSBPL9Q96SU4 736 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 APOL6Q9BWW8 343 aa14.08□□□□□ -0.16
TNC-212ENST00000542877 LDHAP00338 332 aaKnown RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 ICE2Q659A1 982 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 TBC1D10CQ8IV04 446 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 TTC13Q8NBP0 860 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 UPF3AQ9H1J1 476 aaKnown RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 BSDC1Q9NW68 430 aaPredicted RBP14.07□□□□□ -0.16
TNC-212ENST00000542877 ANKARQ7Z5J8 1434 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 NLRP1Q9C000 1473 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 PPP2R2AP63151 447 aa14.07□□□□□ -0.16
TNC-212ENST00000542877 CTTNQ14247 550 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms