RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 BACH1O14867 736 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 GRM6O15303 877 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 ALADP13716 330 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 SREBF1P36956 1147 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 EXOSC10Q01780 885 aaKnown RBP19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 FAM160B1Q5W0V3 765 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 TYW1BQ6NUM6 668 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 NPAS4Q8IUM7 802 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 TRAPPC12Q8WVT3 735 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 CELF4Q9BZC1 486 aaKnown RBP19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 RC3H2Q9HBD1 1191 aaKnown RBP19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 BRPF3Q9ULD4 1205 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 PADI3Q9ULW8 664 aa19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 ARIH1Q9Y4X5 557 aaPredicted RBP19.84■□□□□ 0.77
PPP1CA-210ENST00000542876 KLF18A0A0U1RQI7 1052 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 SMIM35A0A1B0GVV1 85 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 DDX39AO00148 427 aaKnown RBP19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 MEIS1O00470 390 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 HMGB1P09429 215 aaKnown RBP19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 KRT76Q01546 638 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 ITGB3BPQ13352 177 aaPredicted RBP19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 COL19A1Q14993 1142 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 MTHFD1LQ6UB35 978 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 CMTR2Q8IYT2 770 aaKnown RBP19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 PPP2R3CQ969Q6 453 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 PRKAG3Q9UGI9 489 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 LRFN2Q9ULH4 789 aa19.83■□□□□ 0.77
PPP1CA-210ENST00000542876 IGSF9BQ9UPX0 1349 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 CCDC196A0A1B0GTZ2 297 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 HBP1O60381 514 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 CSPG5O95196 566 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 ATG7O95352 703 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 MMP1P03956 469 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 LINC00271P0C7V0 271 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 SCG2P13521 617 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 RCAN1P53805 252 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 FUT2Q10981 343 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 TSGA10IPQ3SY00 556 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 NAALADL2Q58DX5 795 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 NIPA1Q7RTP0 329 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 LINC01599Q8WXQ3 324 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 TMEM260Q9NX78 707 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 GINS2Q9Y248 185 aa19.82■□□□□ 0.76
PPP1CA-210ENST00000542876 KDM3AQ9Y4C1 1321 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 NFX1Q12986 1120 aaKnown RBP19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 ODR4Q5SWX8 454 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 MCTP2Q6DN12 878 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 MIS18BP1Q6P0N0 1132 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 FAM43BQ6ZT52 329 aaPredicted RBP19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 RTN4RL1Q86UN2 441 aaPredicted RBP19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 PLA2G4DQ86XP0 818 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 ATP8B4Q8TF62 1192 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 P2RX5Q93086 422 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 IGFLR1Q9H665 355 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 ALG13Q9NP73 1137 aaKnown RBP19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 C11orf16Q9NQ32 467 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 ZNF302Q9NR11 478 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 RNF216Q9NWF9 866 aaPredicted RBP19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 TCEAL9Q9UHQ7 104 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 PLAGL2Q9UPG8 496 aa19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 MRPL42Q9Y6G3 142 aaKnown RBP19.81■□□□□ 0.76
PPP1CA-210ENST00000542876 IBSPP21815 317 aaPredicted RBP19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 KLRC1P26715 233 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 CLK2P49760 499 aaKnown RBP19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 METAP2P50579 478 aaKnown RBP eCLIP19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 HYAL1Q12794 435 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 CSPP1Q1MSJ5 1256 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 ADCK5Q3MIX3 580 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 PAN2Q504Q3 1202 aaKnown RBP19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 JAKMIP3Q5VZ66 844 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 PDXDC2PQ6P474 469 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 ABHD15Q6UXT9 468 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 CENPQQ7L2Z9 268 aaPredicted RBP19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 RASEFQ8IZ41 740 aa19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 CCDC12Q8WUD4 166 aaPredicted RBP19.8■□□□□ 0.76
PPP1CA-210ENST00000542876 RALGAPA2Q2PPJ7 1873 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 IGKV6D-21A0A0A0MT36 114 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 PRR33A8MZF0 331 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 CDC45O75419 566 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 RPS6KA5O75582 802 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 CCNE2O96020 404 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 CDC27P30260 824 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 CLUL1Q15846 466 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 PFKFB3Q16875 520 aaPredicted RBP19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 TMEM266Q2M3C6 531 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 CTC1Q2NKJ3 1217 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 ZNF484Q5JVG2 852 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 ADHFE1Q8IWW8 467 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 CKAP2LQ8IYA6 745 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 POP1Q99575 1024 aaKnown RBP19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 UPF3BQ9BZI7 483 aaKnown RBP19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 C6orf50Q9HD87 102 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 TBC1D22BQ9NU19 505 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 PCDHB7Q9Y5E2 793 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 COL1A2P08123 1366 aa19.79■□□□□ 0.76
PPP1CA-210ENST00000542876 DENND3A2RUS2 1198 aa19.78■□□□□ 0.76
PPP1CA-210ENST00000542876 FAM86B1E9PN63 330 aa19.78■□□□□ 0.76
PPP1CA-210ENST00000542876 IPO5O00410 1097 aaKnown RBP19.78■□□□□ 0.76
PPP1CA-210ENST00000542876 DCXO43602 365 aa19.78■□□□□ 0.76
PPP1CA-210ENST00000542876 FAM86B2P0C5J1 330 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms