RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 MYMKA6NI61 221 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 RAD17O75943 681 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 PLCG2P16885 1265 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 MYO1EQ12965 1108 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 BIRC3Q13489 604 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 PRPF4BQ13523 1007 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 TNIP1Q15025 636 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 AOC3Q16853 763 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 ASTE1Q2TB18 679 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 ACCSLQ4AC99 568 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 EMC10Q5UCC4 262 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 PODNQ7Z5L7 613 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 ADAT2Q7Z6V5 191 aaKnown RBP5.8□□□□□ -1.48
KDM3B-209ENST00000542866 KIAA0825Q8IV33 1275 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 NELFCDQ8IXH7 590 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 CCDC63Q8NA47 563 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 GLIS3Q8NEA6 775 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 UIMC1Q96RL1 719 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 CCDC113Q9H0I3 377 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 NOD2Q9HC29 1040 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 SLC12A6Q9UHW9 1150 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 STX8Q9UNK0 236 aa5.8□□□□□ -1.48
KDM3B-209ENST00000542866 TLR2O60603 784 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CUL1Q13616 776 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ASIC2Q16515 512 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 NAIF1Q69YI7 327 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ANKS4BQ8N8V4 417 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CCDC197Q8NCU1 140 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 UHMK1Q8TAS1 419 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CELF4Q9BZC1 486 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 TRIM6Q9C030 488 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ZHX3Q9H4I2 956 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 MAGEF1Q9HAY2 307 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CD209Q9NNX6 404 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 MCM9Q9NXL9 1143 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 GGT7Q9UJ14 662 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 PNMA2Q9UL42 364 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 TTI1O43156 1089 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 MARCH6O60337 910 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 GRIN3BO60391 1043 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 KIF4AO95239 1232 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ATP6V1G2O95670 118 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 VIMP08670 466 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ITGA4P13612 1032 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ELF3P78545 371 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 MTMR3Q13615 1198 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CRYMQ14894 314 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 NONOQ15233 471 aaKnown RBP eCLIP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 SLC18A3Q16572 532 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CRY2Q49AN0 593 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CHADLQ6NUI6 762 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 FMNL3Q8IVF7 1028 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ANKS1AQ92625 1134 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 TATDN2Q93075 761 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 STAMBPL1Q96FJ0 436 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CHMP6Q96FZ7 201 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CALR3Q96L12 384 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 AK8Q96MA6 479 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 SPAG5Q96R06 1193 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 MKNK2Q9HBH9 465 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ZNF287Q9HBT7 754 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CEP72Q9P209 647 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 BIN2Q9UBW5 565 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 L3MBTL1Q9Y468 752 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 FLT1P17948 1338 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 USP17L3A6NCW0 530 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 USP17L4A6NCW7 530 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 SMCO2A6NFE2 343 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CCT8L1PA6NM43 557 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 H0YGN5 161 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 LAD1O00515 517 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ORC4O43929 436 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CDC25CP30307 473 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 BYSLQ13895 437 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 UNC13DQ70J99 1090 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 USP17L1Q7RTZ2 530 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 DAAM2Q86T65 1068 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 NSMCE1Q8WV22 266 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 LARP4BQ92615 738 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 TEKT1Q969V4 418 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 DYNLL2Q96FJ2 89 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 FAM84BQ96KN1 310 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 ELAC2Q9BQ52 826 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 LRRC4CQ9HCJ2 640 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 SWAP70Q9UH65 585 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 CLEC11AQ9Y240 323 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 NOC2LQ9Y3T9 749 aaKnown RBP5.79□□□□□ -1.48
KDM3B-209ENST00000542866 COL4A3BPQ9Y5P4 624 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 NFS1Q9Y697 457 aa5.79□□□□□ -1.48
KDM3B-209ENST00000542866 MYH2Q9UKX2 1941 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 BTAF1O14981 1849 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 NHSQ6T4R5 1651 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CCDC189A1A4V9 331 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 SRRM3A6NNA2 597 aaPredicted RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PGRMC1O00264 195 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 HGSO14964 777 aaPredicted RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 ECE2O60344 883 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 USP17L8P0C7I0 530 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms