RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 JADE3Q92613 823 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 Q96M66 194 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 SCLT1Q96NL6 688 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ELF4Q99607 663 aaPredicted RBP4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 ZDHHC5Q9C0B5 715 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 PCIF1Q9H4Z3 704 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 NGRNQ9NPE2 291 aaKnown RBP4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 GTF2IRD1Q9UHL9 959 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 PPP2R3BQ9Y5P8 575 aa4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 BAZ1BQ9UIG0 1483 aaKnown RBP4.86□□□□□ -1.63
SFSWAP-211ENST00000542813 F5H423 210 aaPredicted RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 RBAK-RBAKDNI3L0D1 243 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF561-AS1K7EIQ3 104 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 PIP5K1CO60331 668 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 CBX7O95931 251 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ZBTB48P10074 688 aaPredicted RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 SLC5A1P13866 664 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 VAV1P15498 845 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 KRT15P19012 456 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 BDNFP23560 247 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ECE1P42892 770 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 KIR3DL1P43629 444 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 PDCD1Q15116 288 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 SFRP5Q5T4F7 317 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 MBLAC2Q68D91 279 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 CCDC70Q6NSX1 233 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 LILRA6Q6PI73 481 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 FRMD7Q6ZUT3 714 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 PCGF5Q86SE9 256 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 SKAP1Q86WV1 359 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF655Q8N720 491 aaPredicted RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 DAGLBQ8NCG7 672 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ACRBPQ8NEB7 543 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 NETO1Q8TDF5 533 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 SSH1Q8WYL5 1049 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 HPS3Q969F9 1004 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 TMEM169Q96HH4 297 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 CHAMP1Q96JM3 812 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ACAP3Q96P50 834 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ORAI2Q96SN7 254 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 KCNJ15Q99712 375 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 ACO2Q99798 780 aaKnown RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 GTPBP4Q9BZE4 634 aaKnown RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 SMURF1Q9HCE7 757 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 PRDM5Q9NQX1 630 aaPredicted RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 DNAJC28Q9NX36 388 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 SWAP70Q9UH65 585 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 GTF2A1LQ9UNN4 478 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 LAS1LQ9Y4W2 734 aaKnown RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 PCDHA11Q9Y5I1 949 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 MORC2Q9Y6X9 1032 aaPredicted RBP4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 CNTNAP4Q9C0A0 1308 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 KIF21AQ7Z4S6 1674 aa4.85□□□□□ -1.63
SFSWAP-211ENST00000542813 DVL2O14641 736 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 PQBP1O60828 265 aaKnown RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 HIP1RO75146 1068 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 HRGP04196 525 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 GSTM1P09488 218 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 FAM87AP0C7U9 286 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 ZKSCAN1P17029 563 aaPredicted RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 TYRP1P17643 537 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 FUT4P22083 530 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 TM4SF4P48230 202 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 KIF11P52732 1056 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 ADKP55263 362 aaKnown RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 JAM2P57087 298 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 CDK5R2Q13319 367 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 LSAMPQ13449 338 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 LLGL1Q15334 1064 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 MAPRE1Q15691 268 aaKnown RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 CCDC149Q6ZUS6 474 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 ATG4DQ86TL0 474 aaPredicted RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 OSTM1Q86WC4 334 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 ZNF354CQ86Y25 554 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 TEX2Q8IWB9 1127 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 GRAMD1CQ8IYS0 662 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 PLD6Q8N2A8 252 aaKnown RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 TEX19Q8NA77 164 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 FAM156AQ8NDB6 213 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 POF1BQ8WVV4 589 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 TCTN2Q96GX1 697 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 MAP3K14Q99558 947 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 MAP3K20Q9NYL2 800 aaKnown RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 FBXL7Q9UJT9 491 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 VAV3Q9UKW4 847 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 GPR45Q9Y5Y3 372 aa4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.84□□□□□ -1.63
SFSWAP-211ENST00000542813 CARMIL2Q6F5E8 1435 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 LCHNA4D1U4 455 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 FAM227AF5H4B4 570 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 KCNK3O14649 394 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF205O95201 554 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 AMY2AP04746 511 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 POU2F2P09086 479 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 CD8BP10966 210 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 GNAT1P11488 350 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 AMY2BP19961 511 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 AGXTP21549 392 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms