RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 LZTS1Q9Y250 596 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 MRPS17Q9Y2R5 130 aaKnown RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 PCDHB7Q9Y5E2 793 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 URB1O60287 2271 aaKnown RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 FOCADQ5VW36 1801 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 PATJQ8NI35 1801 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 KIAA1671Q9BY89 1806 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 ACACAQ13085 2346 aa3.9□□□□□ -1.78
CHD4-209ENST00000542717 C2CD3Q4AC94 2353 aa3.9□□□□□ -1.78
CHD4-209ENST00000542717 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 C2orf71A6NGG8 1288 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 H0Y626 953 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 SLC28A2O43868 658 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 IDH1O75874 414 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 TRIM16O95361 564 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 ARIH2O95376 493 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 NDUFB10O96000 172 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 F2P00734 622 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 FDX1P10109 184 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 GNAT1P11488 350 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 SCG2P13521 617 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 LAG3P18627 525 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 CSRP1P21291 193 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 TARSP26639 723 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 ARID4AP29374 1257 aaPredicted RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 MPLP40238 635 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 RPS9P46781 194 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 SIM1P81133 766 aaPredicted RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 EVX2Q03828 476 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 HIC1Q14526 733 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 LY6KQ17RY6 165 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 C4orf17Q53FE4 359 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TAF1BQ53T94 588 aaPredicted RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 MUM1L1Q5H9M0 696 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TTC39AQ5SRH9 613 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TCEAL6Q6IPX3 200 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TPRG1Q6ZUI0 275 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 GET4Q7L5D6 327 aaPredicted RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 RASGRP2Q7LDG7 609 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 LONP2Q86WA8 852 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 AMOTL1Q8IY63 956 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 ZNF710Q8N1W2 664 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 MRPL43Q8N983 215 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.9□□□□□ -1.79
CHD4-209ENST00000542717 FEZF2Q8TBJ5 459 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 PIP4K2CQ8TBX8 421 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TCEAL3Q969E4 200 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 CHMP4CQ96CF2 233 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 SLC4A5Q9BY07 1137 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 PIDD1Q9HB75 910 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 JADE2Q9NQC1 790 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 VPS45Q9NRW7 570 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TCP11L1Q9NUJ3 509 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TYW1Q9NV66 732 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 CCPG1Q9ULG6 757 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 NDRG2Q9UN36 371 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 PA2G4Q9UQ80 394 aaKnown RBP3.9□□□□□ -1.79
CHD4-209ENST00000542717 STK24Q9Y6E0 443 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 NUMBLQ9Y6R0 609 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 TTC3P53804 2025 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 IL16Q14005 1332 aa3.9□□□□□ -1.79
CHD4-209ENST00000542717 GREB1Q4ZG55 1949 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 TENM4Q6N022 2769 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 LOC102724159A0A0B4J2E5 919 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 MAGEB6P1A0A0J9YX57 407 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 SPAARA0A1B0GVQ0 90 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 TMEM232C9JQI7 657 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 HAS3O00219 553 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 APAF1O14727 1248 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 SORBS3O60504 671 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 N4BP1O75113 896 aaKnown RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 EPN2O95208 641 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 SMIM10L2AP0DMW4 78 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 SMIM10L2BP0DMW5 78 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 CCDC192P0DO97 292 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 CYP2D6P10635 497 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 CD52P31358 61 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 PPM1AP35813 382 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 CXCL12P48061 93 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 CDK8P49336 464 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 RARSP54136 660 aaKnown RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 SNAP25P60880 206 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 PFKPQ01813 784 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 SATB1Q01826 763 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 PLCB3Q01970 1234 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 ARHGAP1Q07960 439 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 TFCP2Q12800 502 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 LPIN1Q14693 890 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 PWP2Q15269 919 aaKnown RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 RSPO2Q6UXX9 243 aaPredicted RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 ZNF852Q6ZMS4 543 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 RSPH3Q86UC2 560 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 PPFIBP1Q86W92 1011 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 LSM14AQ8ND56 463 aaKnown RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 CHURC1Q8WUH1 139 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 CLDN23Q96B33 292 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 LOXL4Q96JB6 756 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 ZNF558Q96NG5 402 aa3.89□□□□□ -1.79
CHD4-209ENST00000542717 DDX23Q9BUQ8 820 aaKnown RBP3.89□□□□□ -1.79
CHD4-209ENST00000542717 FTHL17Q9BXU8 183 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms