RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 SART1O43290 800 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 EIF4EBP3O60516 100 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 WDHD1O75717 1129 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 PRPF6O94906 941 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 LINGO3P0C6S8 592 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NAT2P11245 290 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ALAS2P22557 587 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 HOXD12P35452 270 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MATR3P43243 847 aaKnown RBP eCLIP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CTCFP49711 727 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 TPD52P55327 224 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MAP3K10Q02779 954 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 PPP2R3AQ06190 1150 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MVPQ14764 893 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 IFI16Q16666 785 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ELOA3BQ3SY89 546 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CFAP100Q494V2 611 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 C4orf46Q504U0 113 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 PERM1Q5SV97 790 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CYB5RLQ6IPT4 315 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NEPROQ6NW34 567 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 C3orf62Q6ZUJ4 267 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CCDC121Q6ZUS5 278 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 SRGAP1Q7Z6B7 1085 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 PHLDB2Q86SQ0 1253 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ZNF554Q86TJ5 538 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 SYCP3Q8IZU3 236 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ELOA3Q8NG57 546 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 RASSF8Q8NHQ8 419 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 GDAP1Q8TB36 358 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 DDX54Q8TDD1 881 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NSMCE1Q8WV22 266 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NCSTNQ92542 709 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 PPP1R13BQ96KQ4 1090 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 TMEM74Q96NL1 305 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NECAB3Q96P71 396 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 GMLQ99445 158 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MDFIQ99750 246 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 SH3GL2Q99962 352 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NAA15Q9BXJ9 866 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NACAP1Q9BZK3 213 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 YIPF3Q9GZM5 350 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ADAM19Q9H013 955 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CLEC4MQ9H2X3 399 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 PARVGQ9HBI0 331 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 SEC31BQ9NQW1 1179 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 AATFQ9NY61 560 aaKnown RBP eCLIP4.76□□□□□ -1.651e-323■■■□□ 16.4
SNHG1-219ENST00000542112 UBAP1Q9NZ09 502 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 LARSQ9P2J5 1176 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MYO1AQ9UBC5 1043 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 HESX1Q9UBX0 185 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 KLF15Q9UIH9 416 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 HERC5Q9UII4 1024 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 TPCN1Q9ULQ1 816 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MAFFQ9ULX9 164 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 G3BP2Q9UN86 482 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 SCAF8Q9UPN6 1271 aaKnown RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 LZTS1Q9Y250 596 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 PRELID1Q9Y255 219 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 NR2E3Q9Y5X4 410 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MROH2AA6NES4 1674 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 LMTK2Q8IWU2 1503 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MSH6P52701 1360 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 KIF24Q5T7B8 1368 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 LAMC1P11047 1609 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 COL17A1Q9UMD9 1497 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NEURL4Q96JN8 1562 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CPSF1Q10570 1443 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 FAM135BQ49AJ0 1406 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 YTHDC2Q9H6S0 1430 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 IQANK1A0A1B0GTG1 560 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NEURL1BA8MQ27 555 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 MYO1FO00160 1098 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CHL1O00533 1208 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NDUFAB1O14561 156 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 STRNO43815 780 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 USO1O60763 962 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 PFDN1O60925 122 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 PEX14O75381 377 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 FBXO24O75426 580 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 WFS1O76024 890 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 MTA2O94776 668 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SEC31AO94979 1220 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 HNRNPCP07910 306 aaKnown RBP eCLIP4.75□□□□□ -1.653e-9■■□□□ 13.7
SNHG1-219ENST00000542112 PDGFRBP09619 1106 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 MYCLP1P12525 358 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ALADP13716 330 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SFPQP23246 707 aaKnown RBP eCLIP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 MAN1A1P33908 653 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 MLH1P40692 756 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 LIFRP42702 1097 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 RPS26P62854 115 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 BASP1P80723 227 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 MXRA7P84157 204 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ARID5AQ03989 594 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 LRMPQ12912 555 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SAFBQ15424 915 aaKnown RBP eCLIP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SLC44A4Q53GD3 710 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ARMC3Q5W041 872 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 INTS3Q68E01 1043 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms