RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SEC16BQ96JE7 1060 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 C8orf37Q96NL8 207 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 RPS6KC1Q96S38 1066 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 PNKPQ96T60 521 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 NAPGQ99747 312 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 SLF1Q9BQI6 1058 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 SYT15Q9BQS2 421 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 AGXT2Q9BYV1 514 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 OSBPL7Q9BZF2 842 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 API5Q9BZZ5 524 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 KRT23Q9C075 422 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 DNAJC25Q9H1X3 360 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 TMEM134Q9H6X4 195 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 C10orf88Q9H8K7 445 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 GPR108Q9NPR9 543 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 DIABLOQ9NR28 239 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 SH2B1Q9NRF2 756 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 MOCS1Q9NZB8 636 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 EMC3Q9P0I2 261 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 MBD5Q9P267 1494 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 TRIM10Q9UDY6 481 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 SEC63Q9UGP8 760 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 KLF15Q9UIH9 416 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 NRXN1Q9ULB1 1477 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 AGAP1Q9UPQ3 857 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 EXOC7Q9UPT5 735 aa5.61□□□□□ -1.51
SNHG1-218ENST00000541615 APOBEC2Q9Y235 224 aaKnown RBP5.61□□□□□ -1.51
SNHG1-218ENST00000541615 TOP2BQ02880 1626 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 FGD5Q6ZNL6 1462 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PDS5BQ9NTI5 1447 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ARHGAP10A1A4S6 786 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 SPDYE5A6NIY4 337 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 NOTOA8MTQ0 251 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ERVV-2B6SEH9 535 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 KIF28PB7ZC32 967 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 AKR1B15C9JRZ8 316 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 RNF223E7ERA6 249 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 E9PBE3 544 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CASQ2O14958 399 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 RNMTO43148 476 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 TRAPPC3O43617 180 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ADCY3O60266 1144 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 NMT2O60551 498 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 SERPINB7O75635 380 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 KRT75O95678 551 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ITGB3P05106 788 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PABPC4LP0CB38 370 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ZNF12P17014 697 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CTRB1P17538 263 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 NR1D1P20393 614 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 WEE1P30291 646 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 MLLT3P42568 568 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 MAPKAPK2P49137 400 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PCYT1AP49585 367 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CACNA2D1P54289 1103 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 RPL26P61254 145 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CETN1Q12798 172 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 BNIP1Q12981 228 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 STK4Q13043 487 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 UBE4AQ14139 1066 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PSMD6Q15008 389 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ACAP1Q15027 740 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PARP6Q2NL67 630 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 BBS9Q3SYG4 887 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 WASHC2DQ5SRD0 308 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 TRIM68Q6AZZ1 485 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CTRB2Q6GPI1 263 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 LRIG3Q6UXM1 1119 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ZNF662Q6ZS27 426 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 INTS8Q75QN2 995 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CPLX4Q7Z7G2 160 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CROCCP2Q86T23 111 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PATL1Q86TB9 770 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 SPATA24Q86W54 205 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CKAP2LQ8IYA6 745 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 BBS5Q8N3I7 341 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.6□□□□□ -1.512e-11■■■■■ 59.4
SNHG1-218ENST00000541615 ENDOVQ8N8Q3 282 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 EIF1ADQ8N9N8 165 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ANKRD53Q8N9V6 530 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PLEKHO2Q8TD55 490 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CALML6Q8TD86 181 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 SGCDQ92629 289 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 PEX13Q92968 403 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 EME1Q96AY2 570 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 DGCR14Q96DF8 476 aaKnown RBP5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CCDC51Q96ER9 411 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CDCA5Q96FF9 252 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 TSG101Q99816 390 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 FAM167BQ9BTA0 163 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 SELENOOQ9BVL4 669 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 TRPV6Q9H1D0 765 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 BRD9Q9H8M2 597 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 EHMT1Q9H9B1 1298 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 AASDHPPTQ9NRN7 309 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 INIPQ9NRY2 104 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 FAM114A2Q9NRY5 505 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 GIN1Q9NXP7 522 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 DACT1Q9NYF0 836 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 MBD2Q9UBB5 411 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms