RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 RAD51CO43502 376 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 BMT2Q1RMZ1 405 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 GPATCH4Q5T3I0 446 aaKnown RBP10.48□□□□□ -0.73
CNOT4-212ENST00000541284 ANO3Q9BYT9 981 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 TANGO6Q9C0B7 1094 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 NFS1Q9Y697 457 aa10.48□□□□□ -0.73
CNOT4-212ENST00000541284 PON1P27169 355 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 PRKCIP41743 596 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 USP11P51784 963 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 UAP1Q16222 522 aaPredicted RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 MOXD1Q6UVY6 613 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 SLFN11Q7Z7L1 901 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 SLF2Q8IX21 1173 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 MKL1Q969V6 931 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 CAPS2Q9BXY5 557 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 EPB41L5Q9HCM4 733 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 VAV3Q9UKW4 847 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 PCDHAC2Q9Y5I4 1007 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 AKAP3O75969 853 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 TAL1P17542 331 aaPredicted RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 MMP14P50281 582 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 MRPL12P52815 198 aaKnown RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 ADAM9Q13443 819 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 RAPGEF1Q13905 1077 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 TATDN1Q6P1N9 297 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 GBP6Q6ZN66 633 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 SH3BP5LQ7L8J4 393 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 CCDC65Q8IXS2 484 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 C1orf131Q8NDD1 294 aaKnown RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 GMLQ99445 158 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 REEP2Q9BRK0 252 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 SYT11Q9BT88 431 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 IDI2Q9BXS1 227 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 NEUROG2Q9H2A3 272 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 IKZF4Q9H2S9 585 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 FAM86B1E9PN63 330 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 FAM86B2P0C5J1 330 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 UCHL3P15374 230 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 HSPA9P38646 679 aaKnown RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 PAFAH1B1P43034 410 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 HDLBPQ00341 1268 aaKnown RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 MAP3K10Q02779 954 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 GUCY2DQ02846 1103 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 KIAA0753Q2KHM9 967 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 HERC4Q5GLZ8 1057 aaPredicted RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 DACT2Q5SW24 774 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 CCDC181Q5TID7 509 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 SYT2Q8N9I0 419 aaPredicted RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 ZDHHC15Q96MV8 337 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 CCDC43Q96MW1 224 aaKnown RBP10.47□□□□□ -0.73
CNOT4-212ENST00000541284 KRT12Q99456 494 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 HDAC9Q9UKV0 1011 aa10.47□□□□□ -0.73
CNOT4-212ENST00000541284 RSPH10B2B2RC85 870 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 RSPH10BP0C881 870 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 KCNA1Q09470 495 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 KCTD19Q17RG1 926 aaPredicted RBP10.46□□□□□ -0.73
CNOT4-212ENST00000541284 Q4G0T1 1027 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 TTC19Q6DKK2 380 aaPredicted RBP10.46□□□□□ -0.73
CNOT4-212ENST00000541284 FRMD5Q7Z6J6 570 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 NAGPAQ9UK23 515 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 KIF4AO95239 1232 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 NR2F2P24468 414 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 CCT5P48643 541 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 GNGT1P63211 74 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 JAG1P78504 1218 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 KLHL30Q0D2K2 578 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 ASIC2Q16515 512 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 KDM7AQ6ZMT4 941 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 SFR1Q86XK3 245 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 IFT20Q8IY31 132 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 NLGN1Q8N2Q7 840 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 FLAD1Q8NFF5 587 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 KAT2BQ92831 832 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 SLC35C1Q96A29 364 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 POLD4Q9HCU8 107 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 USP40Q9NVE5 1235 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 FBXL5Q9UKA1 691 aa10.46□□□□□ -0.73
CNOT4-212ENST00000541284 A0A0U1RQG5 324 aaPredicted RBP10.46□□□□□ -0.74
CNOT4-212ENST00000541284 VGLL3A8MV65 326 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 F8W031 263 aaPredicted RBP10.46□□□□□ -0.74
CNOT4-212ENST00000541284 TGFB1I1O43294 461 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.74
CNOT4-212ENST00000541284 CASP4P49662 377 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 ARID5AQ03989 594 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 PDCLQ13371 301 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 SF3B2Q13435 895 aaKnown RBP10.46□□□□□ -0.74
CNOT4-212ENST00000541284 KNOP1Q1ED39 458 aaKnown RBP10.46□□□□□ -0.74
CNOT4-212ENST00000541284 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 SLC30A5Q8TAD4 765 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 RNPC3Q96LT9 517 aaKnown RBP10.46□□□□□ -0.74
CNOT4-212ENST00000541284 FIZ1Q96SL8 496 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 GPR88Q9GZN0 384 aa10.46□□□□□ -0.74
CNOT4-212ENST00000541284 MEIS1O00470 390 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 DDX3XO00571 662 aaKnown RBP eCLIP10.45□□□□□ -0.74
CNOT4-212ENST00000541284 RPA1P27694 616 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 ARHGAP4P98171 946 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 POU5F1Q01860 360 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms