RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 AK8Q96MA6 479 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 HSD17B14Q9BPX1 270 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 TRPV6Q9H1D0 765 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 TUFT1Q9NNX1 390 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 TRMT13Q9NUP7 481 aaKnown RBP21.06■□□□□ 0.96
VPS33A-205ENST00000541169 CFAP45Q9UL16 551 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 MBLAC1A4D2B0 266 aaPredicted RBP21.05■□□□□ 0.96
VPS33A-205ENST00000541169 EML1O00423 815 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 MAGEB2O15479 319 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 TIMP1P01033 207 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 INSRRP14616 1297 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 RAG1P15918 1043 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 ADAM17P78536 824 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 PRKCEQ02156 737 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 RBL2Q08999 1139 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 SF3A1Q15459 793 aaKnown RBP21.05■□□□□ 0.96
VPS33A-205ENST00000541169 LMBR1Q8WVP7 490 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 LBHD1Q9BQE6 289 aaPredicted RBP21.05■□□□□ 0.96
VPS33A-205ENST00000541169 EIF2AK1Q9BQI3 630 aaKnown RBP21.05■□□□□ 0.96
VPS33A-205ENST00000541169 POLR3CQ9BUI4 534 aaPredicted RBP21.05■□□□□ 0.96
VPS33A-205ENST00000541169 NIFKQ9BYG3 293 aaKnown RBP21.05■□□□□ 0.96
VPS33A-205ENST00000541169 HIPK3Q9H422 1215 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 PRDM5Q9NQX1 630 aaPredicted RBP21.05■□□□□ 0.96
VPS33A-205ENST00000541169 SETD4Q9NVD3 440 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 LRWD1Q9UFC0 647 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 TUBE1Q9UJT0 475 aa21.05■□□□□ 0.96
VPS33A-205ENST00000541169 BRD1O95696 1058 aa21.04■□□□□ 0.96
VPS33A-205ENST00000541169 RPA1P27694 616 aa21.04■□□□□ 0.96
VPS33A-205ENST00000541169 RPAINQ86UA6 219 aa21.04■□□□□ 0.96
VPS33A-205ENST00000541169 RETREG2Q8NC44 543 aa21.04■□□□□ 0.96
VPS33A-205ENST00000541169 JPH2Q9BR39 696 aaPredicted RBP21.04■□□□□ 0.96
VPS33A-205ENST00000541169 LXNQ9BS40 222 aa21.04■□□□□ 0.96
VPS33A-205ENST00000541169 ATP4AP20648 1035 aa21.03■□□□□ 0.96
VPS33A-205ENST00000541169 KRT79Q5XKE5 535 aa21.03■□□□□ 0.96
VPS33A-205ENST00000541169 FAM43BQ6ZT52 329 aaPredicted RBP21.03■□□□□ 0.96
VPS33A-205ENST00000541169 TMEM199Q8N511 208 aa21.03■□□□□ 0.96
VPS33A-205ENST00000541169 PCDHA2Q9Y5H9 948 aa21.03■□□□□ 0.96
VPS33A-205ENST00000541169 MYH15Q9Y2K3 1946 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 POTEMA6NI47 508 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 ZNF862O60290 1169 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 SLITRK3O94933 977 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 YEATS4O95619 227 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 RFC2P35250 354 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 LONP1P36776 959 aaKnown RBP21.02■□□□□ 0.96
VPS33A-205ENST00000541169 NASPP49321 788 aaPredicted RBP21.02■□□□□ 0.96
VPS33A-205ENST00000541169 SLC39A14Q15043 492 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 TPH2Q8IWU9 490 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 NME8Q8N427 588 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 BANK1Q8NDB2 785 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 NOC4LQ9BVI4 516 aaKnown RBP21.02■□□□□ 0.96
VPS33A-205ENST00000541169 ANKEF1Q9NU02 776 aa21.02■□□□□ 0.96
VPS33A-205ENST00000541169 MKI67P46013 3256 aaKnown RBP21.02■□□□□ 0.95
VPS33A-205ENST00000541169 TRIM43BA6NCK2 446 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 DDX11L8A8MPP1 907 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 GAS2O43903 313 aaKnown RBP21.01■□□□□ 0.95
VPS33A-205ENST00000541169 TMOD1P28289 359 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 YWHABP31946 246 aaKnown RBP21.01■□□□□ 0.95
VPS33A-205ENST00000541169 CDC42EP1Q00587 391 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 UGCGQ16739 394 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 MFSD5Q6N075 450 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 TRIM43Q96BQ3 446 aaPredicted RBP21.01■□□□□ 0.95
VPS33A-205ENST00000541169 DYDC2Q96IM9 177 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 NACC1Q96RE7 527 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 NT5C3AQ9H0P0 336 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 CIZ1Q9ULV3 898 aaPredicted RBP21.01■□□□□ 0.95
VPS33A-205ENST00000541169 KDM3AQ9Y4C1 1321 aa21.01■□□□□ 0.95
VPS33A-205ENST00000541169 SMIM35A0A1B0GVV1 85 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 VWA3AA6NCI4 1184 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 TREHO43280 583 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 PFKMP08237 780 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 KLRC1P26715 233 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 RFC5P40937 340 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 PTPAQ15257 358 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 MARCH8Q5T0T0 291 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 MTHFD1LQ6UB35 978 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 CTAGE1Q96RT6 745 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 RGL1Q9NZL6 768 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 SEPT9Q9UHD8 586 aaPredicted RBP21■□□□□ 0.95
VPS33A-205ENST00000541169 SRPRBQ9Y5M8 271 aaKnown RBP21■□□□□ 0.95
VPS33A-205ENST00000541169 CLIC4Q9Y696 253 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 PDE4DIPQ5VU43 2346 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 DNAH12Q6ZR08 3092 aa21■□□□□ 0.95
VPS33A-205ENST00000541169 H0YGN5 161 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 CYP2C9P11712 490 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 SELPP16109 830 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 DNM2P50570 870 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 IGBP1P78318 339 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 CYP4A11Q02928 519 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 TBC1D8BQ0IIM8 1120 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 TARBP2Q15633 366 aaKnown RBP20.99■□□□□ 0.95
VPS33A-205ENST00000541169 PRPF38BQ5VTL8 546 aaKnown RBP20.99■□□□□ 0.95
VPS33A-205ENST00000541169 IER5Q5VY09 327 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 SH3RF1Q7Z6J0 888 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 CATSPER3Q86XQ3 398 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 KCNG4Q8TDN1 519 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 CCDC43Q96MW1 224 aaKnown RBP20.99■□□□□ 0.95
VPS33A-205ENST00000541169 USP28Q96RU2 1077 aa20.99■□□□□ 0.95
VPS33A-205ENST00000541169 ZBTB42B2RXF5 422 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 M0QZ92 97 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 PPP6R2O75170 966 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms