RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 KCNV2Q8TDN2 545 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 TTLL3Q9Y4R7 772 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 CFAP74Q9C0B2 1584 aa16.08■□□□□ 0.17
SMARCA4-207ENST00000541122 COPEO14579 308 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 PRCPP42785 496 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 OCA2Q04671 838 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 FAM47EQ6ZV65 393 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 AGGF1Q8N302 714 aaeCLIP16.08■□□□□ 0.164e-6■■■■□ 20.3
SMARCA4-207ENST00000541122 WDR91A4D1P6 747 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 GNPATO15228 680 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 MCF2P10911 925 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 RAPH1Q70E73 1250 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 ZNF710Q8N1W2 664 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 C3orf20Q8ND61 904 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 SAYSD1Q9NPB0 183 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 ANLNQ9NQW6 1124 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 GEMIN8Q9NWZ8 242 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 FBXL5Q9UKA1 691 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 TLK1Q9UKI8 766 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 HSPA9P38646 679 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 CHRNDQ07001 517 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 BBS9Q3SYG4 887 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 LRRC47Q8N1G4 583 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 TAB3Q8N5C8 712 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 CCDC17Q96LX7 622 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 SENP1Q9P0U3 644 aa16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 APOBEC2Q9Y235 224 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-207ENST00000541122 GOLGA8CPA6NN73 597 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 TJP3O95049 919 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 NCF2P19878 526 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 RANBP1P43487 201 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 HOOK2Q96ED9 719 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 RBM41Q96IZ5 413 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 TMPRSS15P98073 1019 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 PROCA1Q8NCQ7 364 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 GREM2Q9H772 168 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 PICK1Q9NRD5 415 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 TRIP13Q15645 432 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 SPATA21Q7Z572 469 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 PARVGQ9HBI0 331 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 EEF1B2P24534 225 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 ANXA13P27216 316 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 CDC25AP30304 524 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 ARFIP2P53365 341 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 GFPT1Q06210 699 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 TAF12Q16514 161 aa16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 DARS2Q6PI48 645 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-207ENST00000541122 KRT38O76015 456 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 IRAK1P51617 712 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 ESYT3A0FGR9 886 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 ZBTB22O15209 634 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 GPC5P78333 572 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 TTC13Q8NBP0 860 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 MMS19Q96T76 1030 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 SEPT10Q9P0V9 454 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 CLIC2O15247 247 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 KLC1Q07866 573 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 CCDC92Q53HC0 331 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 FAM83BQ5T0W9 1011 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 CATSPER1Q8NEC5 780 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 THOC1Q96FV9 657 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 PFASO15067 1338 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 GNGT2O14610 69 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 HNRNPDLO14979 420 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 MED7O43513 233 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 TMOD1P28289 359 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 SHC4Q6S5L8 630 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 LRRC1Q9BTT6 524 aa16.06■□□□□ 0.16
SMARCA4-207ENST00000541122 TRIM49BA6NDI0 452 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 H2AFXP16104 143 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 CPXCR1Q8N123 301 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 CNPY4Q8N129 248 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 CACYBPQ9HB71 228 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 PSMD14O00487 310 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 BTDP43251 543 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 CUL3Q13618 768 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 KCNB1Q14721 858 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 MOV10L1Q9BXT6 1211 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 DDX47Q9H0S4 455 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 CCDC22O60826 627 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 BRD2P25440 801 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 HNRNPH1P31943 449 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 LSP1P33241 339 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 MRPS35P82673 323 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 TTC17Q96AE7 1141 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 KRT10P13645 584 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 RFX1P22670 979 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 DDIT3P35638 169 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 C16orf87Q6PH81 154 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 STAG2Q8N3U4 1231 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 ICA1LQ8NDH6 482 aa16.05■□□□□ 0.16
SMARCA4-207ENST00000541122 NCK2O43639 380 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms