RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 SEL1L2Q5TEA6 688 aa10.41□□□□□ -0.74
TTC39C-203ENST00000540918 CATSPER3Q86XQ3 398 aa10.41□□□□□ -0.74
TTC39C-203ENST00000540918 KRT222Q8N1A0 295 aa10.41□□□□□ -0.74
TTC39C-203ENST00000540918 LRRC71Q8N4P6 559 aa10.41□□□□□ -0.74
TTC39C-203ENST00000540918 ASIC3Q9UHC3 531 aa10.41□□□□□ -0.74
TTC39C-203ENST00000540918 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
TTC39C-203ENST00000540918 NALCNQ8IZF0 1738 aa10.41□□□□□ -0.74
TTC39C-203ENST00000540918 A0A087X0B3 334 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 TXNP10599 105 aaKnown RBP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 ACOT2P49753 483 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 HUNKP57058 714 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 PSMC6P62333 389 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 RNF187Q5TA31 235 aaPredicted RBP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 AGBL3Q8NEM8 1001 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 NLGN2Q8NFZ4 835 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 MSTO1Q9BUK6 570 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 DDX41Q9UJV9 622 aaKnown RBP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 MFAP3LO75121 409 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 FXR1P51114 621 aaKnown RBP eCLIP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 USP11P51784 963 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 DPYDQ12882 1025 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 LONRF2Q1L5Z9 754 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 SPOUT1Q5T280 376 aaKnown RBP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 DNAAF5Q86Y56 855 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 ATRIPQ8WXE1 791 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 NT5C1BQ96P26 610 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 TSGA10Q9BZW7 698 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 KCNF1Q9H3M0 494 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 SLC5A4Q9NY91 659 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 PTPN22Q9Y2R2 807 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 GOLGB1Q14789 3259 aaKnown RBP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 MSH4O15457 936 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 CELF2O95319 508 aaKnown RBP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 P4HBP07237 508 aaKnown RBP10.4□□□□□ -0.74
TTC39C-203ENST00000540918 AP5M1Q9H0R1 490 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 MAGEF1Q9HAY2 307 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 HDAC6Q9UBN7 1215 aa10.4□□□□□ -0.74
TTC39C-203ENST00000540918 MED24O75448 989 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 MYL3P08590 195 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 YWHABP31946 246 aaKnown RBP10.39□□□□□ -0.75
TTC39C-203ENST00000540918 ZNF157P51786 506 aaPredicted RBP10.39□□□□□ -0.75
TTC39C-203ENST00000540918 KIF11P52732 1056 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 TNNC1P63316 161 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 SLC7A5Q01650 507 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 CDHR1Q96JP9 859 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 MMP19Q99542 508 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 SELENOSQ9BQE4 189 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 TRIM10Q9UDY6 481 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 MON2Q7Z3U7 1717 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 GAP43P17677 238 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 VCAM1P19320 739 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 SNX1Q13596 522 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 KNOP1Q1ED39 458 aaKnown RBP10.39□□□□□ -0.75
TTC39C-203ENST00000540918 HAUS6Q7Z4H7 955 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 MAK16Q9BXY0 300 aaKnown RBP10.39□□□□□ -0.75
TTC39C-203ENST00000540918 ZNF302Q9NR11 478 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 NUB1Q9Y5A7 615 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 A0A1W2PRG0 241 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 WDR46O15213 610 aaKnown RBP10.39□□□□□ -0.75
TTC39C-203ENST00000540918 DYNC1LI2O43237 492 aaPredicted RBP10.39□□□□□ -0.75
TTC39C-203ENST00000540918 THAP12O43422 761 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 TNNC2P02585 160 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 MCM3P25205 808 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 PDE6CP51160 858 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 HAUS4Q9H6D7 363 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 PCDHA10Q9Y5I2 948 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 LTN1O94822 1766 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 DLG5Q8TDM6 1919 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 KIAA0754O94854 1291 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 ZBED6P86452 979 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 PPP1R21Q6ZMI0 780 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 RNF149Q8NC42 400 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 FAM149B1Q96BN6 582 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 CCSER1Q9C0I3 900 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 DNAI2Q9GZS0 605 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 JPH1Q9HDC5 661 aaPredicted RBP10.39□□□□□ -0.75
TTC39C-203ENST00000540918 DNAJC12Q9UKB3 198 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 INPP5FQ9Y2H2 1132 aa10.39□□□□□ -0.75
TTC39C-203ENST00000540918 KRIT1O00522 736 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CLDN3O15551 220 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 NCK2O43639 380 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 ARPP19P56211 112 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CALCOCO2Q13137 446 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CFAP58Q5T655 872 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 LIN9Q5TKA1 542 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CCDC51Q96ER9 411 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 THAP9Q9H5L6 903 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 TBC1D22BQ9NU19 505 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 ABHD10Q9NUJ1 306 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 AMFRQ9UKV5 643 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 MTUS1Q9ULD2 1270 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CCL15-CCL14A0A0B4J2E2 113 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 LGALS16A8MUM7 142 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 PIK3R2O00459 728 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 DYNLT1P63172 113 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 LRRC63Q05C16 580 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CCL15Q16663 113 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 ALKBH5Q6P6C2 394 aaKnown RBP10.38□□□□□ -0.75
TTC39C-203ENST00000540918 CATSPER4Q7RTX7 472 aa10.38□□□□□ -0.75
TTC39C-203ENST00000540918 ZNF653Q96CK0 615 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms