RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 VEZTQ9HBM0 779 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 PGAP2Q9UHJ9 254 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 MYO1FO00160 1098 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 ENC1O14682 589 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 ZNF263O14978 683 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 ERLIN2O94905 339 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 EYA4O95677 639 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 CFBP00751 764 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 BRD3Q15059 726 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 PAPD7Q5XG87 772 aaKnown RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 SLC30A10Q6XR72 485 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 WDR18Q9BV38 432 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 GLIS2Q9BZE0 524 aaPredicted RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 ZHX3Q9H4I2 956 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 EHMT1Q9H9B1 1298 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 CEP72Q9P209 647 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 TRAF3IP3Q9Y228 551 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 MRPL11Q9Y3B7 192 aaKnown RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 EML1O00423 815 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 EIF4A3P38919 411 aaKnown RBP12.44□□□□□ -0.42
LGR5-203ENST00000540815 CAP2P40123 477 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 KIF11P52732 1056 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 CYP27A1Q02318 531 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 KIF5AQ12840 1032 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 ADAM9Q13443 819 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 CCDC155Q8N6L0 562 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 SMCR8Q8TEV9 937 aaPredicted RBP12.44□□□□□ -0.42
LGR5-203ENST00000540815 TUFT1Q9NNX1 390 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 ZNRF3Q9ULT6 936 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.44□□□□□ -0.42
LGR5-203ENST00000540815 ANO9A1A5B4 782 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 CETN3O15182 167 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 SRGAP2O75044 1071 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 SYF2O95926 243 aaKnown RBP12.44□□□□□ -0.42
LGR5-203ENST00000540815 ATP1A1P05023 1023 aaKnown RBP12.44□□□□□ -0.42
LGR5-203ENST00000540815 PPP2R5CQ13362 524 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 MIGA2Q7L4E1 593 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 CACNA2D4Q7Z3S7 1137 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 SFR1Q86XK3 245 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 SYN2Q92777 582 aaPredicted RBP12.44□□□□□ -0.42
LGR5-203ENST00000540815 SLC5A5Q92911 643 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
LGR5-203ENST00000540815 CD248Q9HCU0 757 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 RAB21Q9UL25 225 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 RABGAP1Q9Y3P9 1069 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 PCDHA13Q9Y5I0 950 aa12.44□□□□□ -0.42
LGR5-203ENST00000540815 USO1O60763 962 aaKnown RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 PSMD10O75832 226 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 CASP5P51878 434 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 CYP4A11Q02928 519 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 KCTD19Q17RG1 926 aaPredicted RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 KNOP1Q1ED39 458 aaKnown RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 BMT2Q1RMZ1 405 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 OTOP1Q7RTM1 612 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 CCDC91Q7Z6B0 441 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 HSD17B14Q9BPX1 270 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 HDAC6Q9UBN7 1215 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 SCAF8Q9UPN6 1271 aaKnown RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 SAR1BQ9Y6B6 198 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 SSU72P8A0A1W2PR75 194 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 NOL4O94818 638 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 ASTE1Q2TB18 679 aaPredicted RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 KRT26Q7Z3Y9 468 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 RUSC1Q9BVN2 902 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 LSM14BQ9BX40 385 aaKnown RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 BHMT2Q9H2M3 363 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 PDXKO00764 312 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 CALUO43852 315 aaPredicted RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 MUTP22033 750 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 NR2F2P24468 414 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 FRMD5Q7Z6J6 570 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 HNRNPLLQ8WVV9 542 aaKnown RBP12.43□□□□□ -0.42
LGR5-203ENST00000540815 DEFB129Q9H1M3 183 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 FBXO28Q9NVF7 368 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 RGL1Q9NZL6 768 aa12.43□□□□□ -0.42
LGR5-203ENST00000540815 LOXHD1Q8IVV2 1947 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 AKR1B10O60218 316 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 TBCAO75347 108 aaKnown RBP12.42□□□□□ -0.42
LGR5-203ENST00000540815 GAP43P17677 238 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 HOXD13P35453 343 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 PRELPP51888 382 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 CXCL9Q07325 125 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 HGSNATQ68CP4 663 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 CNPY4Q8N129 248 aa12.42□□□□□ -0.42
LGR5-203ENST00000540815 CAPZA3Q96KX2 299 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms