RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 CCDC125Q86Z20 511 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 TPH2Q8IWU9 490 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 PIGOQ8TEQ8 1089 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 CCDC42Q96M95 316 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 NACC1Q96RE7 527 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 TFR2Q9UP52 801 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 COL11A1P12107 1806 aaPredicted RBP15.18■□□□□ 0.02
RTN3-210ENST00000540798 UBE4BO95155 1302 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 RBAK-RBAKDNI3L0D1 243 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 DHX15O43143 795 aaKnown RBP15.18■□□□□ 0.02
RTN3-210ENST00000540798 PRPF6O94906 941 aaKnown RBP15.18■□□□□ 0.02
RTN3-210ENST00000540798 TUBB4BP68371 445 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 PCNX4Q63HM2 1172 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 RRAGAQ7L523 313 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 TSGA10Q9BZW7 698 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 GANQ9H2C0 597 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 SEL1LQ9UBV2 794 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 HACL1Q9UJ83 578 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 PPP1R9AQ9ULJ8 1098 aa15.18■□□□□ 0.02
RTN3-210ENST00000540798 ZRANB2O95218 330 aaKnown RBP eCLIP15.17■□□□□ 0.02
RTN3-210ENST00000540798 KIF11P52732 1056 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 KIAA1328Q86T90 577 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 ODF2LQ9ULJ1 636 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 CHMP2AO43633 222 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 VCAM1P19320 739 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 ERCC3P19447 782 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 EIF4A3P38919 411 aaKnown RBP15.17■□□□□ 0.02
RTN3-210ENST00000540798 CHMP4BP1P59074 171 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 IL31RAQ8NI17 732 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 PNMA2Q9UL42 364 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 MYO6Q9UM54 1294 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 ZBTB39O15060 712 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 PJA2O43164 708 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 TGFB1I1O43294 461 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 TLR2O60603 784 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 IPO7O95373 1038 aaKnown RBP15.17■□□□□ 0.02
RTN3-210ENST00000540798 GUCY2CP25092 1073 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 KCNH2Q12809 1159 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 DGKZQ13574 1117 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 SAMD7Q7Z3H4 446 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 SYTL5Q8TDW5 730 aaPredicted RBP15.17■□□□□ 0.02
RTN3-210ENST00000540798 BORCS6Q96GS4 357 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 LSM14BQ9BX40 385 aaKnown RBP15.17■□□□□ 0.02
RTN3-210ENST00000540798 STRA6Q9BX79 667 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
RTN3-210ENST00000540798 CYP27A1Q02318 531 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 MUM1L1Q5H9M0 696 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 PLCB1Q9NQ66 1216 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 KCNH7Q9NS40 1196 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 CNOT7Q9UIV1 285 aaKnown RBP15.16■□□□□ 0.02
RTN3-210ENST00000540798 DICER1Q9UPY3 1922 aaKnown RBP15.16■□□□□ 0.02
RTN3-210ENST00000540798 ANO9A1A5B4 782 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 AKAP3O75969 853 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 NR3C1P04150 777 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 FDX1P10109 184 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
RTN3-210ENST00000540798 LXNQ9BS40 222 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 PARVGQ9HBI0 331 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 AGO4Q9HCK5 861 aaKnown RBP15.16■□□□□ 0.02
RTN3-210ENST00000540798 JADE2Q9NQC1 790 aa15.16■□□□□ 0.02
RTN3-210ENST00000540798 ARGLU1Q9NWB6 273 aaPredicted RBP15.16■□□□□ 0.02
RTN3-210ENST00000540798 GCNT3O95395 438 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 USP14P54578 494 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 SPA17Q15506 151 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 TKFCQ3LXA3 575 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 MSANTD4Q8NCY6 345 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 METTL14Q9HCE5 456 aaKnown RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 RAVER2Q9HCJ3 691 aaKnown RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 AIPL1Q9NZN9 384 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 ARMCX3Q9UH62 379 aaPredicted RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 FAM13AO94988 1023 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 RPL13P26373 211 aaKnown RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 KCNA1Q09470 495 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 KIF5AQ12840 1032 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 ITGB3BPQ13352 177 aaPredicted RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 MTMR2Q13614 643 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 NBPF12Q5TAG4 269 aaPredicted RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 CACNA2D4Q7Z3S7 1137 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 EPC1Q9H2F5 836 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 DUSP10Q9Y6W6 482 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 WDR90Q96KV7 1748 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 WDR81Q562E7 1941 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 LYPLA2O95372 231 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 AFPP02771 609 aaKnown RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 ATP1A1P05023 1023 aaKnown RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 SERPING1P05155 500 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 RASSF7Q02833 373 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 MAPK7Q13164 816 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 TBC1D10BQ4KMP7 808 aaPredicted RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 ZNF720Q7Z2F6 126 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 SCYL3Q8IZE3 742 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 IFIH1Q9BYX4 1025 aaKnown RBP15.15■□□□□ 0.02
RTN3-210ENST00000540798 ANKZF1Q9H8Y5 726 aa15.15■□□□□ 0.02
RTN3-210ENST00000540798 PPP1R37O75864 691 aa15.14■□□□□ 0.01
RTN3-210ENST00000540798 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
RTN3-210ENST00000540798 RPAP3Q9H6T3 665 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms