RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ATF7P17544 494 aaPredicted RBP8.39□□□□□ -1.07
YBX3-209ENST00000540747 CHMLP26374 656 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 MARK3P27448 753 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 NRIP1P48552 1158 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 NDUFV1P49821 464 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 PTPN5P54829 565 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 TRDNQ13061 729 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 PLCB4Q15147 1175 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 PKN1Q16512 942 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 TTC22Q5TAA0 569 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 CATIPQ7Z7H3 387 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 ZNF654Q8IZM8 581 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 SRBD1Q8N5C6 995 aaKnown RBP8.39□□□□□ -1.07
YBX3-209ENST00000540747 NCOA7Q8NI08 942 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 SMARCC2Q8TAQ2 1214 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 POF1BQ8WVV4 589 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 PIBF1Q8WXW3 757 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 RRP36Q96EU6 259 aaKnown RBP8.39□□□□□ -1.07
YBX3-209ENST00000540747 MYL10Q9BUA6 226 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 PHF7Q9BWX1 381 aaPredicted RBP8.39□□□□□ -1.07
YBX3-209ENST00000540747 IGFLR1Q9H665 355 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 JADE2Q9NQC1 790 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 BARX2Q9UMQ3 279 aaPredicted RBP8.39□□□□□ -1.07
YBX3-209ENST00000540747 TRPV2Q9Y5S1 764 aa8.39□□□□□ -1.07
YBX3-209ENST00000540747 PLXNA4Q9HCM2 1894 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 NFASCO94856 1347 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 IGKV6D-21A0A0A0MT36 114 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 SMIM35A0A1B0GVV1 85 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 ERICH2A1L162 156 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 MAFGO15525 162 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 SGSM2O43147 1006 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 ATG7O95352 703 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 SARSP49591 514 aaKnown RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 RBM10P98175 930 aaKnown RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 UBE3AQ05086 875 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 SIGLEC14Q08ET2 396 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 ITGB3BPQ13352 177 aaPredicted RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 MTMR1Q13613 665 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 SART3Q15020 963 aaKnown RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 UBE2SQ16763 222 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 DUSP6Q16828 381 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 IER5Q5VY09 327 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 TMEM184AQ6ZMB5 413 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 PLPPR4Q7Z2D5 763 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 RALYLQ86SE5 291 aaKnown RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 FBXL6Q8N531 539 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 TRAPPC12Q8WVT3 735 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 TMEM40Q8WWA1 233 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 GLG1Q92896 1179 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 MAP4K1Q92918 833 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 CUL5Q93034 780 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 PPP2R3CQ969Q6 453 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 SNX27Q96L92 541 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 PRRX2Q99811 253 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 LZTS2Q9BRK4 669 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 CELF4Q9BZC1 486 aaKnown RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 FAM49AQ9H0Q0 323 aaPredicted RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 S1PR5Q9H228 398 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 PSTPIP2Q9H939 334 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 ERVK-5Q9HDB9 667 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 JPH1Q9HDC5 661 aaPredicted RBP8.38□□□□□ -1.07
YBX3-209ENST00000540747 DCHS1Q96JQ0 3298 aa8.38□□□□□ -1.07
YBX3-209ENST00000540747 FNDC1Q4ZHG4 1894 aaPredicted RBP8.37□□□□□ -1.07
YBX3-209ENST00000540747 ZBTB42B2RXF5 422 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 C9IYK1 514 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 SH2B2O14492 632 aaPredicted RBP8.37□□□□□ -1.07
YBX3-209ENST00000540747 CSPG5O95196 566 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 STAG3L1P0CL83 205 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 KIF5BP33176 963 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 VCPP55072 806 aaKnown RBP8.37□□□□□ -1.07
YBX3-209ENST00000540747 ACTR2P61160 394 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 IGBP1P78318 339 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 FAM189BP81408 668 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 PAK2Q13177 524 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 PAN2Q504Q3 1202 aaKnown RBP8.37□□□□□ -1.07
YBX3-209ENST00000540747 TYW1BQ6NUM6 668 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 KIAA0319LQ8IZA0 1049 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 NME8Q8N427 588 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 CTCFLQ8NI51 663 aaPredicted RBP8.37□□□□□ -1.07
YBX3-209ENST00000540747 CYP2W1Q8TAV3 490 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 RASGRP4Q8TDF6 673 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 PBXIP1Q96AQ6 731 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 CDCA3Q99618 268 aaPredicted RBP8.37□□□□□ -1.07
YBX3-209ENST00000540747 MXRA8Q9BRK3 442 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 CWH43Q9H720 699 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 CDHR5Q9HBB8 845 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 RGS18Q9NS28 235 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 KCNH7Q9NS40 1196 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 RNF19AQ9NV58 838 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 SLC9A2Q9UBY0 812 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 PCDHA6Q9UN73 950 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 PCDHA8Q9Y5H6 950 aa8.37□□□□□ -1.07
YBX3-209ENST00000540747 FSD2A1L4K1 749 aa8.36□□□□□ -1.07
YBX3-209ENST00000540747 ST18O60284 1047 aa8.36□□□□□ -1.07
YBX3-209ENST00000540747 FGF18O76093 207 aa8.36□□□□□ -1.07
YBX3-209ENST00000540747 CCNE2O96020 404 aa8.36□□□□□ -1.07
YBX3-209ENST00000540747 ARP10275 920 aa8.36□□□□□ -1.07
YBX3-209ENST00000540747 LIFRP42702 1097 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms