RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CPA1P15085 419 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 JAK3P52333 1124 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
CDCA3-208ENST00000540683 NTRK3Q16288 839 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 PRR16Q569H4 304 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 TRAF7Q6Q0C0 670 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 MOXD1Q6UVY6 613 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 ABHD15Q6UXT9 468 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 KRT25Q7Z3Z0 450 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 EXOC8Q8IYI6 725 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 TET1Q8NFU7 2136 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 ATP8B4Q8TF62 1192 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 CRYGNQ8WXF5 182 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 PHKBQ93100 1093 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 TOP1MTQ969P6 601 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 NRBP2Q9NSY0 501 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 TRANK1O15050 2925 aa11.76□□□□□ -0.53
CDCA3-208ENST00000540683 UNC80Q8N2C7 3258 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 ARP10275 920 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 MYOGP15173 224 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 GCFC2P16383 781 aaKnown RBP11.75□□□□□ -0.53
CDCA3-208ENST00000540683 ERVK-21P61565 698 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 IGBP1P78318 339 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 HTRA4P83105 476 aaPredicted RBP11.75□□□□□ -0.53
CDCA3-208ENST00000540683 PAK2Q13177 524 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 COL9A3Q14050 684 aaPredicted RBP11.75□□□□□ -0.53
CDCA3-208ENST00000540683 MBTPS1Q14703 1052 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 PLCB4Q15147 1175 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
CDCA3-208ENST00000540683 PKN1Q16512 942 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 BLIDQ8IZY5 108 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 DAGLBQ8NCG7 672 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 IL17RAQ96F46 866 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 MAP7D2Q96T17 732 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 JPH2Q9BR39 696 aaPredicted RBP11.75□□□□□ -0.53
CDCA3-208ENST00000540683 BCAS3Q9H6U6 928 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 TMEM260Q9NX78 707 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 TRPV2Q9Y5S1 764 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 STK36Q9NRP7 1315 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 KDM3AQ9Y4C1 1321 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 MICAL3Q7RTP6 2002 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 CDH23Q9H251 3354 aa11.75□□□□□ -0.53
CDCA3-208ENST00000540683 MYH9P35579 1960 aaKnown RBP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 IGLV3-22A0A075B6J6 115 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 CCDC194A0A1B0GVG4 234 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 FAM86B1E9PN63 330 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 NCK2O43639 380 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 RB1P06400 928 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 FAM86B2P0C5J1 330 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 DEFB103AP81534 67 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 TOB2Q14106 344 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 TRIM29Q14134 588 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 GPNMBQ14956 572 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 NONOQ15233 471 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 MTHFD1LQ6UB35 978 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 MICALL1Q8N3F8 863 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 CYP2W1Q8TAV3 490 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 DNAJB3Q8WWF6 145 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 PPM1EQ8WY54 764 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 WNT8BQ93098 351 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 PGBD1Q96JS3 809 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 TEKT3Q9BXF9 490 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 CELF4Q9BZC1 486 aaKnown RBP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 UPF3BQ9BZI7 483 aaKnown RBP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 MAFBQ9Y5Q3 323 aaPredicted RBP11.74□□□□□ -0.53
CDCA3-208ENST00000540683 CDY2AQ9Y6F7 541 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 COL4A6Q14031 1691 aa11.74□□□□□ -0.53
CDCA3-208ENST00000540683 CYP3A7-CYP3A51PA0A087WV96 503 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 CARNS1A5YM72 827 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 DDX39AO00148 427 aaKnown RBP11.73□□□□□ -0.53
CDCA3-208ENST00000540683 GPR182O15218 404 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 MARCH6O60337 910 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 CHRNA1P02708 482 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 GHRP10912 638 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 CYP3A7P24462 503 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 KLRC1P26715 233 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 DNM2P50570 870 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 HIC1Q14526 733 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 GSE1Q14687 1217 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 LPIN1Q14693 890 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 Q4G0T1 1027 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 TIGD5Q53EQ6 642 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 NAALADL2Q58DX5 795 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 FBXO47Q5MNV8 452 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 LRCH2Q5VUJ6 765 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 SWSAP1Q6NVH7 229 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 FIBCD1Q8N539 461 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
CDCA3-208ENST00000540683 RSPH1Q8WYR4 309 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 PPP2R3CQ969Q6 453 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 ASB2Q96Q27 587 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 C11orf84Q9BUA3 381 aaPredicted RBP11.73□□□□□ -0.53
CDCA3-208ENST00000540683 FAM49AQ9H0Q0 323 aaPredicted RBP11.73□□□□□ -0.53
CDCA3-208ENST00000540683 LMAN2LQ9H0V9 348 aa11.73□□□□□ -0.53
CDCA3-208ENST00000540683 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms