RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 HERC4Q5GLZ8 1057 aaPredicted RBP17.1■□□□□ 0.33
USB1-203ENST00000539737 ZNF654Q8IZM8 581 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 GLG1Q92896 1179 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
USB1-203ENST00000539737 PPP1R16BQ96T49 567 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 APOL5Q9BWW9 433 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
USB1-203ENST00000539737 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 RB1P06400 928 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 CALM1P0DP23 149 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 CALM2P0DP24 149 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 CALM3P0DP25 149 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 INSRRP14616 1297 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 TSHZ1Q6ZSZ6 1077 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 SRBD1Q8N5C6 995 aaKnown RBP17.09■□□□□ 0.33
USB1-203ENST00000539737 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 POF1BQ8WVV4 589 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 LMAN2LQ9H0V9 348 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
USB1-203ENST00000539737 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
USB1-203ENST00000539737 MBLAC1A4D2B0 266 aaPredicted RBP17.08■□□□□ 0.32
USB1-203ENST00000539737 TMEM221A6NGB7 291 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 M0R296 226 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 MGEA5O60502 916 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 GNAQP50148 359 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 VCPP55072 806 aaKnown RBP17.08■□□□□ 0.32
USB1-203ENST00000539737 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
USB1-203ENST00000539737 SGMS1Q86VZ5 419 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 CRIPAKQ8N1N5 446 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 RPGRIP1Q96KN7 1286 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 LRRC2Q9BYS8 371 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 CDHR5Q9HBB8 845 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 SEC63Q9UGP8 760 aaKnown RBP17.08■□□□□ 0.32
USB1-203ENST00000539737 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
USB1-203ENST00000539737 SLC12A7Q9Y666 1083 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 CFAP54Q96N23 3096 aa17.08■□□□□ 0.32
USB1-203ENST00000539737 ZFHX2Q9C0A1 2572 aaPredicted RBP17.07■□□□□ 0.32
USB1-203ENST00000539737 FGD1P98174 961 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 TAF2Q6P1X5 1199 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 SYNE3Q6ZMZ3 975 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 NLRX1Q86UT6 975 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 SEPT1Q8WYJ6 367 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 EDAQ92838 391 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 CUL5Q93034 780 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
USB1-203ENST00000539737 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 LZTS2Q9BRK4 669 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 PADI3Q9ULW8 664 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 TRPC6Q9Y210 931 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 GINS2Q9Y248 185 aa17.07■□□□□ 0.32
USB1-203ENST00000539737 DMDP11532 3685 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 STAM2O75886 525 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 PDGFBP01127 241 aaPredicted RBP17.06■□□□□ 0.32
USB1-203ENST00000539737 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 TCF15Q12870 199 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 TRIM67Q6ZTA4 783 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 PBXIP1Q96AQ6 731 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 TCEANC2Q96MN5 208 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
USB1-203ENST00000539737 ERAP1Q9NZ08 941 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 TRPV2Q9Y5S1 764 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 UBIAD1Q9Y5Z9 338 aa17.06■□□□□ 0.32
USB1-203ENST00000539737 DDX39AO00148 427 aaKnown RBP17.05■□□□□ 0.32
USB1-203ENST00000539737 ANAPC15P60006 121 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 MTMR1Q13613 665 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 PLCB4Q15147 1175 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 FAM102BQ5T8I3 360 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 CMTR2Q8IYT2 770 aaKnown RBP17.05■□□□□ 0.32
USB1-203ENST00000539737 SMRP1Q8NCR6 262 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 TMEM40Q8WWA1 233 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 GPRASP2Q96D09 838 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 MFSD14AQ96MC6 490 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 RWDD3Q9Y3V2 267 aa17.05■□□□□ 0.32
USB1-203ENST00000539737 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
USB1-203ENST00000539737 PIK3CDO00329 1044 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 NCK2O43639 380 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 EYA4O95677 639 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 ARP10275 920 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 SCG2P13521 617 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 PBX3P40426 434 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 RCAN1P53805 252 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 ERVFC1P60507 584 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 ZXDAP98168 799 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
USB1-203ENST00000539737 PAK2Q13177 524 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 TYW1BQ6NUM6 668 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms