RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 USP11P51784 963 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 NLRP5P59047 1200 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 SETQ01105 290 aaPredicted RBP19.04■□□□□ 0.64
DDB1-215ENST00000539712 FBXO47Q5MNV8 452 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 SWSAP1Q6NVH7 229 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 MYOCDQ8IZQ8 938 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 SP7Q8TDD2 431 aaPredicted RBP19.04■□□□□ 0.64
DDB1-215ENST00000539712 ATP8B4Q8TF62 1192 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 AGO3Q9H9G7 860 aaKnown RBP19.04■□□□□ 0.64
DDB1-215ENST00000539712 TBC1D22BQ9NU19 505 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 CDY2AQ9Y6F7 541 aa19.04■□□□□ 0.64
DDB1-215ENST00000539712 CPLX1O14810 134 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 MSH4O15457 936 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 PFKFB2O60825 505 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 CTDNEP1O95476 244 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 SEC24BO95487 1268 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 ERVK-21P61565 698 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 MRPS6P82932 125 aaKnown RBP19.03■□□□□ 0.64
DDB1-215ENST00000539712 GRB10Q13322 594 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 ZNF746Q6NUN9 644 aaPredicted RBP19.03■□□□□ 0.64
DDB1-215ENST00000539712 MTHFD1LQ6UB35 978 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 DAGLBQ8NCG7 672 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 APBB2Q92870 758 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 FAM49AQ9H0Q0 323 aaPredicted RBP19.03■□□□□ 0.64
DDB1-215ENST00000539712 INSL6Q9Y581 213 aa19.03■□□□□ 0.64
DDB1-215ENST00000539712 MAFBQ9Y5Q3 323 aaPredicted RBP19.03■□□□□ 0.64
DDB1-215ENST00000539712 BACH1O14867 736 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 KLRC1P26715 233 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 MIS18BP1Q6P0N0 1132 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 RSPH3Q86UC2 560 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 BLIDQ8IZY5 108 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 TBCKQ8TEA7 893 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 SLC5A5Q92911 643 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 GJA10Q969M2 543 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 SUGCTQ9HAC7 445 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 ZNF302Q9NR11 478 aa19.02■□□□□ 0.64
DDB1-215ENST00000539712 CYP3A7-CYP3A51PA0A087WV96 503 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 SMIM35A0A1B0GVV1 85 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 ENPP3O14638 875 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 HBP1O60381 514 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 CYP3A7P24462 503 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 AK2P54819 239 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 TMEM62Q0P6H9 643 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 FAM160B1Q5W0V3 765 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 PDXDC2PQ6P474 469 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 RTN4RL1Q86UN2 441 aaPredicted RBP19.01■□□□□ 0.63
DDB1-215ENST00000539712 SMAP1Q8IYB5 467 aaPredicted RBP19.01■□□□□ 0.63
DDB1-215ENST00000539712 KIAA0319LQ8IZA0 1049 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 FAM177A1Q8N128 213 aaPredicted RBP19.01■□□□□ 0.63
DDB1-215ENST00000539712 LINC01599Q8WXQ3 324 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 TNPO1Q92973 898 aaKnown RBP19.01■□□□□ 0.63
DDB1-215ENST00000539712 MBOAT7Q96N66 472 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 GJB4Q9NTQ9 266 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 KCNJ14Q9UNX9 436 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 PCDHA10Q9Y5I2 948 aa19.01■□□□□ 0.63
DDB1-215ENST00000539712 BDP1A6H8Y1 2624 aa19■□□□□ 0.63
DDB1-215ENST00000539712 RPLP2P05387 115 aaKnown RBP19■□□□□ 0.63
DDB1-215ENST00000539712 KRT76Q01546 638 aa19■□□□□ 0.63
DDB1-215ENST00000539712 Q4G0T1 1027 aa19■□□□□ 0.63
DDB1-215ENST00000539712 IER5Q5VY09 327 aa19■□□□□ 0.63
DDB1-215ENST00000539712 GALNT17Q6IS24 598 aa19■□□□□ 0.63
DDB1-215ENST00000539712 CPLX2Q6PUV4 134 aaKnown RBP19■□□□□ 0.63
DDB1-215ENST00000539712 TSHZ1Q6ZSZ6 1077 aa19■□□□□ 0.63
DDB1-215ENST00000539712 CRIPAKQ8N1N5 446 aa19■□□□□ 0.63
DDB1-215ENST00000539712 TGS1Q96RS0 853 aaKnown RBP19■□□□□ 0.63
DDB1-215ENST00000539712 RIT2Q99578 217 aa19■□□□□ 0.63
DDB1-215ENST00000539712 C17orf80Q9BSJ5 609 aa19■□□□□ 0.63
DDB1-215ENST00000539712 PHF20Q9BVI0 1012 aa19■□□□□ 0.63
DDB1-215ENST00000539712 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
DDB1-215ENST00000539712 MTUS1Q9ULD2 1270 aa19■□□□□ 0.63
DDB1-215ENST00000539712 SQORQ9Y6N5 450 aa19■□□□□ 0.63
DDB1-215ENST00000539712 KDM3AQ9Y4C1 1321 aa19■□□□□ 0.63
DDB1-215ENST00000539712 COL1A2P08123 1366 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 ZNF862O60290 1169 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 UPP2O95045 317 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 LARGE1O95461 756 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 TDP2O95551 362 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 FDPSP14324 419 aaKnown RBP18.99■□□□□ 0.63
DDB1-215ENST00000539712 CD52P31358 61 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 ZNF484Q5JVG2 852 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 B3GNT9Q6UX72 402 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 NME8Q8N427 588 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 GDPD5Q8WTR4 605 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 CELF4Q9BZC1 486 aaKnown RBP18.99■□□□□ 0.63
DDB1-215ENST00000539712 CDHR5Q9HBB8 845 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 GABBR1Q9UBS5 961 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 TRPV2Q9Y5S1 764 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 STK36Q9NRP7 1315 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 IGSF9BQ9UPX0 1349 aa18.99■□□□□ 0.63
DDB1-215ENST00000539712 TTC3P53804 2025 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 PSMD10O75832 226 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 C22orf31O95567 290 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 PSAPP07602 524 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 LINC00271P0C7V0 271 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 ME3Q16798 604 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 MICALL1Q8N3F8 863 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 NECAB1Q8N987 351 aa18.98■□□□□ 0.63
DDB1-215ENST00000539712 ATXN2LQ8WWM7 1075 aaKnown RBP18.98■□□□□ 0.63
DDB1-215ENST00000539712 BBXQ8WY36 941 aaPredicted RBP18.98■□□□□ 0.63
DDB1-215ENST00000539712 C22orf23Q9BZE7 217 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms