RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	PDXDC2P	Q6P474	469 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	NECAB1	Q8N987	351 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ETNPPL	Q8TBG4	499 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TNFRSF25	Q93038	417 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	KCNMB3	Q9NPA1	279 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	DISC1	Q9NRI5	854 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TRPC6	Q9Y210	931 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	IGSF9B	Q9UPX0	1349 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ZBBX	A8MT70	800 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MAGEB2	O15479	319 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ST18	O60284	1047 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MARK3	P27448	753 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	WDR5	P61964	334 aa	Known RBP	13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MGAT3	Q09327	533 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ST3GAL1	Q11201	340 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	INF2	Q27J81	1249 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	IER5	Q5VY09	327 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SWSAP1	Q6NVH7	229 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SEPT8	Q92599	483 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TTYH1	Q9H313	450 aa	Predicted RBP	13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ZNF576	Q9H609	170 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	DDX25	Q9UHL0	483 aa	Known RBP	13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	CHD9	Q3L8U1	2897 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MICAL3	Q7RTP6	2002 aa		13.9	□□□□□ -0.18
CLTCL1-205	ENST00000538828	DDX39A	O00148	427 aa	Known RBP	13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	DKC1	O60832	514 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	2e-6	■■■■□ 22.2
CLTCL1-205	ENST00000538828	TDP2	O95551	362 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CHRNA1	P02708	482 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PPP2R5C	Q13362	524 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	ORC2	Q13416	577 aa	Predicted RBP	13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	MTHFD1L	Q6UB35	978 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828		Q7L0L9	218 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	HERC6	Q8IVU3	1022 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	SLFN12	Q8IYM2	578 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	DBF4B	Q8NFT6	615 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	GUCD1	Q96NT3	240 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	SLC28A3	Q9HAS3	691 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	NRBP2	Q9NSY0	501 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PPME1	Q9Y570	386 aa		13.89	□□□□□ -0.19
CLTCL1-205	ENST00000538828	ATP4A	P20648	1035 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	MRPS6	P82932	125 aa	Known RBP	13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	SAFB	Q15424	915 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	LETM2	Q2VYF4	491 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	ODR4	Q5SWX8	454 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	KRT40	Q6A162	431 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PIK3AP1	Q6ZUJ8	805 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TBC1D32	Q96NH3	1257 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	GABBR1	Q9UBS5	961 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	KIF3A	Q9Y496	699 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	SAMM50	Q9Y512	469 aa		13.88	□□□□□ -0.19
CLTCL1-205	ENST00000538828	GBF1	Q92538	1859 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	EVPL	Q92817	2033 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	COL6A3	P12111	3177 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	GRXCR1	A8MXD5	290 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	ZBTB42	B2RXF5	422 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828		M0QZ92	97 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	JAK2	O60674	1132 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	GJB5	O95377	273 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	BAG4	O95429	457 aa	Known RBP	13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	KLRC1	P26715	233 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CDC42EP1	Q00587	391 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	FBXO47	Q5MNV8	452 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	RUFY4	Q6ZNE9	571 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TSHZ1	Q6ZSZ6	1077 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	MIER3	Q7Z3K6	550 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CCDC83	Q8IWF9	413 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	DIS3L2	Q8IYB7	885 aa	Known RBP	13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	FBXO18	Q8NFZ0	1043 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	OXER1	Q8TDS5	423 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	DNAJB3	Q8WWF6	145 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CDX2	Q99626	313 aa	Predicted RBP	13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	RAD9A	Q99638	391 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	FTHL17	Q9BXU8	183 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	NIFK	Q9BYG3	293 aa	Known RBP	13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	IFIH1	Q9BYX4	1025 aa	Known RBP	13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	FOXP1	Q9H334	677 aa	Predicted RBP	13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	UNC45A	Q9H3U1	944 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	GJB4	Q9NTQ9	266 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	COL4A6	Q14031	1691 aa		13.87	□□□□□ -0.19
CLTCL1-205	ENST00000538828	BTBD18	B2RXH4	712 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	SLC37A4	O43826	429 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	ZNF862	O60290	1169 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CCNT1	O60563	726 aa	Known RBP	13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	C22orf31	O95567	290 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	AMH	P03971	560 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	OAT	P04181	439 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TMOD1	P28289	359 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	PBX2	P40425	430 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	NR5A1	Q13285	461 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TARBP2	Q15633	366 aa	Known RBP	13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	XKR3	Q5GH77	459 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CKAP2L	Q8IYA6	745 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	EXOC8	Q8IYI6	725 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	KIAA0319L	Q8IZA0	1049 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	C8orf76	Q96K31	380 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CELF4	Q9BZC1	486 aa	Known RBP	13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CHD7	Q9P2D1	2997 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	YBX2	Q9Y2T7	364 aa	Known RBP	13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	TRPV2	Q9Y5S1	764 aa		13.86	□□□□□ -0.19
CLTCL1-205	ENST00000538828	CDY2A	Q9Y6F7	541 aa		13.86	□□□□□ -0.19

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