RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 MAFBQ9Y5Q3 323 aaPredicted RBP19.27■□□□□ 0.68
CLN6-202ENST00000538696 KAT6AQ92794 2004 aa19.27■□□□□ 0.67
CLN6-202ENST00000538696 F2P00734 622 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 P4HBP07237 508 aaKnown RBP19.26■□□□□ 0.67
CLN6-202ENST00000538696 ASGR1P07306 291 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 STAT5BP51692 787 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 FAM160B1Q5W0V3 765 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 KRT79Q5XKE5 535 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 CXCL17Q6UXB2 119 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 CABP7Q86V35 215 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 PCSK9Q8NBP7 692 aaKnown RBP19.26■□□□□ 0.67
CLN6-202ENST00000538696 KAT2BQ92831 832 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 ERCC4Q92889 916 aaPredicted RBP19.26■□□□□ 0.67
CLN6-202ENST00000538696 DHX58Q96C10 678 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 LXNQ9BS40 222 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 TSEN34Q9BSV6 310 aaKnown RBP19.26■□□□□ 0.67
CLN6-202ENST00000538696 POLR3CQ9BUI4 534 aaPredicted RBP19.26■□□□□ 0.67
CLN6-202ENST00000538696 RBSNQ9H1K0 784 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 AZI2Q9H6S1 392 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 TUFT1Q9NNX1 390 aa19.26■□□□□ 0.67
CLN6-202ENST00000538696 POTEB3A0JP26 581 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 MOXD2PA6NHM9 499 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 DNM1LO00429 736 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 ZNF862O60290 1169 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 KPNA6O60684 536 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 SLITRK3O94933 977 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 ATP4AP20648 1035 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 RPA1P27694 616 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 CCT6AP40227 531 aaKnown RBP19.25■□□□□ 0.67
CLN6-202ENST00000538696 QARSP47897 775 aaKnown RBP19.25■□□□□ 0.67
CLN6-202ENST00000538696 MNX1P50219 401 aaPredicted RBP19.25■□□□□ 0.67
CLN6-202ENST00000538696 ACLYP53396 1101 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 PSMC5P62195 406 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 TYRO3Q06418 890 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 ECM1Q16610 540 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 POTEBQ6S5H4 581 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 PLPPR4Q7Z2D5 763 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 CATSPER3Q86XQ3 398 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 CNNM3Q8NE01 707 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 GLG1Q92896 1179 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 ATP6V0A1Q93050 837 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 PNMA5Q96PV4 448 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 SMARCAD1Q9H4L7 1026 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 PHF24Q9UPV7 400 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 STK24Q9Y6E0 443 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 KBTBD13C9JR72 458 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 TFRCP02786 760 aaKnown RBP19.25■□□□□ 0.67
CLN6-202ENST00000538696 CCDC192P0DO97 292 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 UBA7P41226 1012 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 GRB10Q13322 594 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 PDXDC2PQ6P474 469 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 MTG1Q9BT17 334 aaPredicted RBP19.25■□□□□ 0.67
CLN6-202ENST00000538696 CCSER1Q9C0I3 900 aa19.25■□□□□ 0.67
CLN6-202ENST00000538696 KDM3AQ9Y4C1 1321 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 TRIP12Q14669 1992 aaPredicted RBP19.24■□□□□ 0.67
CLN6-202ENST00000538696 H3BRB1 525 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 HAS3O00219 553 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 STBD1O95210 358 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 MARK3P27448 753 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
CLN6-202ENST00000538696 TXLNAP40222 546 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 PSEN2P49810 448 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 PRKCEQ02156 737 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 MFSD10Q14728 455 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 KARSQ15046 597 aaKnown RBP19.24■□□□□ 0.67
CLN6-202ENST00000538696 PLCB4Q15147 1175 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 E2F4Q16254 413 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 TMEM119Q4V9L6 283 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 HYIQ5T013 277 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 POTEGQ6S5H5 508 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 TPH2Q8IWU9 490 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 GRAMD1CQ8IYS0 662 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 ABHD8Q96I13 439 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 TUT1Q9H6E5 874 aaKnown RBP19.24■□□□□ 0.67
CLN6-202ENST00000538696 ZSWIM4Q9H7M6 989 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 GRPEL1Q9HAV7 217 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 ERAP1Q9NZ08 941 aa19.24■□□□□ 0.67
CLN6-202ENST00000538696 ZNF215Q9UL58 517 aaPredicted RBP19.24■□□□□ 0.67
CLN6-202ENST00000538696 A0A087WWV3 80 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 A0A1W2PQ45 241 aaPredicted RBP19.23■□□□□ 0.67
CLN6-202ENST00000538696 A0A1W2PQY0 241 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 SLC26A4O43511 780 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 LYPLA2O95372 231 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 OATP04181 439 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 PRR29P0C7W0 189 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 SLC26A2P50443 739 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 PSMC6P62333 389 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 PNOCQ13519 176 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
CLN6-202ENST00000538696 SASS6Q6UVJ0 657 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 C4orf19Q8IY42 314 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 ELOA2Q8IYF1 753 aaPredicted RBP19.23■□□□□ 0.67
CLN6-202ENST00000538696 ANKLE1Q8NAG6 615 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 DIS3LQ8TF46 1054 aaKnown RBP19.23■□□□□ 0.67
CLN6-202ENST00000538696 LRRC15Q8TF66 581 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 PLIN2Q99541 437 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 KATNAL1Q9BW62 490 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 KIAA1468Q9P260 1216 aa19.23■□□□□ 0.67
CLN6-202ENST00000538696 USP25Q9UHP3 1055 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms