RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 PKN1Q16512 942 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 MAP7D1Q3KQU3 841 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 MEI1Q5TIA1 1274 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 DENND2CQ68D51 928 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 KRT26Q7Z3Y9 468 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 SPATA24Q86W54 205 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 IRF2BP1Q8IU81 584 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 SLC15A3Q8IY34 581 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 ALDH16A1Q8IZ83 802 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 STAG2Q8N3U4 1231 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 SCFD2Q8WU76 684 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 SCG3Q8WXD2 468 aaKnown RBP13.46□□□□□ -0.26
USP3-203ENST00000538686 NEUROD6Q96NK8 337 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 TXLNGYQ9BZA5 131 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 METTL14Q9HCE5 456 aaKnown RBP13.46□□□□□ -0.26
USP3-203ENST00000538686 CNOT7Q9UIV1 285 aaKnown RBP13.46□□□□□ -0.26
USP3-203ENST00000538686 R3HDM2Q9Y2K5 976 aaKnown RBP13.46□□□□□ -0.26
USP3-203ENST00000538686 STK24Q9Y6E0 443 aa13.46□□□□□ -0.26
USP3-203ENST00000538686 PIK3C2AO00443 1686 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 SSU72P8A0A1W2PR75 194 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 TRAFD1O14545 582 aaPredicted RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 FOXO3O43524 673 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 LYNP07948 512 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 PORP16435 677 aaPredicted RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 MTTPP55157 894 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 ADARP55265 1226 aaKnown RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 GSTM4Q03013 218 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 CFAP157Q5JU67 520 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 SLC17A8Q8NDX2 589 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 NEK9Q8TD19 979 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 AIFM3Q96NN9 605 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 GPCPD1Q9NPB8 672 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 HSFX1Q9UBD0 423 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 DBNLQ9UJU6 430 aaKnown RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 UTP11Q9Y3A2 253 aaKnown RBP13.45□□□□□ -0.26
USP3-203ENST00000538686 DISP2A7MBM2 1401 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 MYH2Q9UKX2 1941 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
USP3-203ENST00000538686 IPO5O00410 1097 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 P4HA2O15460 535 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 RANBP6O60518 1105 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 KRT38O76015 456 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 VAV1P15498 845 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 HDAC4P56524 1084 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 PPARDQ03181 441 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 TNNI3KQ59H18 835 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 GRAMD4Q6IC98 578 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 TMEM110Q86TL2 294 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 NELFCDQ8IXH7 590 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 SNRNP27Q8WVK2 155 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 LPIN2Q92539 896 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 FMO2Q99518 471 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 ZNF184Q99676 751 aaPredicted RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 ASCC2Q9H1I8 757 aaPredicted RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 PABPC3Q9H361 631 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP3-203ENST00000538686 VPS54Q9P1Q0 977 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 TRIM33Q9UPN9 1127 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 FPGT-TNNI3KV9GXZ4 949 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 POTEFA5A3E0 1075 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 TRIM43BA6NCK2 446 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 GRM8O00222 908 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 STRNO43815 780 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 ZFYP08048 801 aaPredicted RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 POTEIP0CG38 1075 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 SLC34A1Q06495 639 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 POTEEQ6S8J3 1075 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 LRRC74BQ6ZQY2 392 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 MTMR8Q96EF0 704 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 TUBGCP2Q9BSJ2 902 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 FGFR1OP2Q9NVK5 253 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 ARHGAP20Q9P2F6 1191 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 ZNF212Q9UDV6 495 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 GGT7Q9UJ14 662 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
USP3-203ENST00000538686 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
USP3-203ENST00000538686 CPS1P31327 1500 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 CCDC162PA2VCL2 907 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 HTR3EA5X5Y0 456 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 TCP11X1B4DZS4 312 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 RBAK-RBAKDNI3L0D1 243 aa13.43□□□□□ -0.26
USP3-203ENST00000538686 GM2AP17900 193 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms