RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 LRRC34Q8IZ02 419 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 LMBR1Q8WVP7 490 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 DDX12PQ92771 950 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 SPDL1Q96EA4 605 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 CCDC134Q9H6E4 229 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 IL17RBQ9NRM6 502 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 SUCLA2Q9P2R7 463 aaPredicted RBP20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 BZW2Q9Y6E2 419 aaKnown RBP20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 ATAD5Q96QE3 1844 aa20.25■□□□□ 0.83
SFSWAP-207ENST00000538548 TXKP42681 527 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 POU5F1Q01860 360 aaKnown RBP20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 SLFN11Q7Z7L1 901 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 AGAP11Q8TF27 550 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 NGLY1Q96IV0 654 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 SELENOSQ9BQE4 189 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 CELF4Q9BZC1 486 aaKnown RBP20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 RAB17Q9H0T7 212 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 NAPAP54920 295 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 TFAP4Q01664 338 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 DDB1Q16531 1140 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 ZNF571Q7Z3V5 609 aaPredicted RBP20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 ATP8B4Q8TF62 1192 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 ADAM7Q9H2U9 754 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 NAGPAQ9UK23 515 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 ATP8B3O60423 1300 aa20.24■□□□□ 0.83
SFSWAP-207ENST00000538548 CCDC169A6NNP5 214 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 FXR2P51116 673 aaKnown RBP eCLIP20.23■□□□□ 0.834e-8■■■■■ 35.7
SFSWAP-207ENST00000538548 ICA1Q05084 483 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 PTPROQ16827 1216 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 FAM133BQ5BKY9 247 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 SUSD4Q5VX71 490 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 IRF2BP2Q7Z5L9 587 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 NSRP1Q9H0G5 558 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 STXBP5LQ9Y2K9 1186 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 KCNQ2O43526 872 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 GNA11P29992 359 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 NT5C2P49902 561 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 SYCE1Q8N0S2 351 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 ZNF483Q8TF39 744 aaPredicted RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 ELAC2Q9BQ52 826 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 EPB41L4BQ9H329 900 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 PABPC3Q9H361 631 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 C6orf50Q9HD87 102 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 NQO1P15559 274 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 CDCA2Q69YH5 1023 aaPredicted RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 ALKBH5Q6P6C2 394 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 MARCH10Q8NA82 808 aaPredicted RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 NEK9Q8TD19 979 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 NSUN4Q96CB9 384 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 MTMR9Q96QG7 549 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 INTS9Q9NV88 658 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 TTC7AQ9ULT0 858 aaPredicted RBP20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 AGAP1Q9UPQ3 857 aa20.23■□□□□ 0.83
SFSWAP-207ENST00000538548 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 EPS15P42566 896 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 TMEM266Q2M3C6 531 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 TBCKQ8TEA7 893 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 LZTS2Q9BRK4 669 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 KIAA1551Q9HCM1 1747 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 SMCO2A6NFE2 343 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 FLOT1O75955 427 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 SHBGP04278 402 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 CCND1P24385 295 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 COASYQ13057 564 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 CHADLQ6NUI6 762 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 PTF1AQ7RTS3 328 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 ZNF570Q96NI8 536 aa20.22■□□□□ 0.83
SFSWAP-207ENST00000538548 A0A0A6YYK5 440 aaPredicted RBP20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 PALM3A6NDB9 673 aaPredicted RBP20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 ANXA13P27216 316 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 SEPT2Q15019 361 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 CALCRLQ16602 461 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 DENND2CQ68D51 928 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 HES6Q96HZ4 224 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 TRIM51Q9BSJ1 452 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 RAB34Q9BZG1 259 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 TRIM31Q9BZY9 425 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 KANSL2Q9H9L4 492 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 SPATS2LQ9NUQ6 558 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 ABCF3Q9NUQ8 709 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 VIMP08670 466 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 ZNF131P52739 623 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 PMS2P54278 862 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 NCALDP61601 193 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 KCTD19Q17RG1 926 aaPredicted RBP20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 NT5DC3Q86UY8 548 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 PRMT1Q99873 361 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 ZDHHC18Q9NUE0 388 aa20.21■□□□□ 0.83
SFSWAP-207ENST00000538548 GOLGA6L10A0A0M3HER8 536 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 RGS16O15492 202 aaPredicted RBP20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 AGTP01019 485 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 KCNJ2P63252 427 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 PPP2R5EQ16537 467 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 CAVIN4Q5BKX8 364 aa20.2■□□□□ 0.82
SFSWAP-207ENST00000538548 CAPRIN2Q6IMN6 1127 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms