RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 SAMM50Q9Y512 469 aa24.29■■□□□ 1.48
CCDC78-215ENST00000538176 POU3F3P20264 500 aaPredicted RBP24.28■■□□□ 1.48
CCDC78-215ENST00000538176 MRPS6P82932 125 aaKnown RBP24.28■■□□□ 1.48
CCDC78-215ENST00000538176 MGAT3Q09327 533 aa24.28■■□□□ 1.48
CCDC78-215ENST00000538176 MTHFD1LQ6UB35 978 aa24.28■■□□□ 1.48
CCDC78-215ENST00000538176 CCDC60Q8IWA6 550 aaPredicted RBP24.28■■□□□ 1.48
CCDC78-215ENST00000538176 CKAP2LQ8IYA6 745 aa24.28■■□□□ 1.48
CCDC78-215ENST00000538176 RDM1Q8NG50 284 aa24.28■■□□□ 1.48
CCDC78-215ENST00000538176 TOP1MTQ969P6 601 aa24.28■■□□□ 1.48
CCDC78-215ENST00000538176 FAM167AQ96KS9 214 aa24.28■■□□□ 1.48
CCDC78-215ENST00000538176 NAP1L4Q99733 375 aaKnown RBP24.28■■□□□ 1.48
CCDC78-215ENST00000538176 MSH4O15457 936 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 GAS7O60861 476 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 IGFBP4P22692 258 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 JAK3P52333 1124 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 TCTN1Q2MV58 587 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 MYOCDQ8IZQ8 938 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 ZNF710Q8N1W2 664 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 SLC5A5Q92911 643 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 TEKT3Q9BXF9 490 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 ORC3Q9UBD5 711 aaPredicted RBP24.27■■□□□ 1.48
CCDC78-215ENST00000538176 CDY2AQ9Y6F7 541 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 CDH23Q9H251 3354 aa24.27■■□□□ 1.48
CCDC78-215ENST00000538176 CCDC194A0A1B0GVG4 234 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 GTPBP6O43824 516 aaPredicted RBP24.26■■□□□ 1.47
CCDC78-215ENST00000538176 KLRC1P26715 233 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 NPY5RQ15761 445 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 FBXO47Q5MNV8 452 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.26■■□□□ 1.47
CCDC78-215ENST00000538176 TSHZ1Q6ZSZ6 1077 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 FTHL17Q9BXU8 183 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 DISC1Q9NRI5 854 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 NRBP2Q9NSY0 501 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 KDM3AQ9Y4C1 1321 aa24.26■■□□□ 1.47
CCDC78-215ENST00000538176 EDIL3O43854 480 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 HTRA4P83105 476 aaPredicted RBP24.25■■□□□ 1.47
CCDC78-215ENST00000538176 ADGRE1Q14246 886 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 ODR4Q5SWX8 454 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 LRCH2Q5VUJ6 765 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 GTF3C6Q969F1 213 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 MBOAT7Q96N66 472 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 AIFM3Q96NN9 605 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 CELF4Q9BZC1 486 aaKnown RBP24.25■■□□□ 1.47
CCDC78-215ENST00000538176 FAM49AQ9H0Q0 323 aaPredicted RBP24.25■■□□□ 1.47
CCDC78-215ENST00000538176 BRMS1Q9HCU9 246 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 TRPV2Q9Y5S1 764 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 CHD9Q3L8U1 2897 aa24.25■■□□□ 1.47
CCDC78-215ENST00000538176 MYH9P35579 1960 aaKnown RBP24.24■■□□□ 1.47
CCDC78-215ENST00000538176 MICAL3Q7RTP6 2002 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 MAGEB2O15479 319 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 GHRP10912 638 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 GCFC2P16383 781 aaKnown RBP24.24■■□□□ 1.47
CCDC78-215ENST00000538176 LPIN1Q14693 890 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 ME3Q16798 604 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 ARNTL2Q8WYA1 636 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 TGS1Q96RS0 853 aaKnown RBP24.24■■□□□ 1.47
CCDC78-215ENST00000538176 TSPYL2Q9H2G4 693 aaPredicted RBP24.24■■□□□ 1.47
CCDC78-215ENST00000538176 LMCD1Q9NZU5 365 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 GABBR1Q9UBS5 961 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 KCNJ14Q9UNX9 436 aa24.24■■□□□ 1.47
CCDC78-215ENST00000538176 ATP4AP20648 1035 aa24.23■■□□□ 1.47
CCDC78-215ENST00000538176 ERVK-21P61565 698 aa24.23■■□□□ 1.47
CCDC78-215ENST00000538176 PPP4R3AQ6IN85 833 aa24.23■■□□□ 1.47
CCDC78-215ENST00000538176 SAMD11Q96NU1 681 aa24.23■■□□□ 1.47
CCDC78-215ENST00000538176 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-215ENST00000538176 PSMD10O75832 226 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 CTDNEP1O95476 244 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 SEC24BO95487 1268 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 TMCO2Q7Z6W1 182 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-215ENST00000538176 NEK8Q86SG6 692 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 IL27Q8NEV9 243 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 TRAPPC12Q8WVT3 735 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 FAM20AQ96MK3 541 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 UIMC1Q96RL1 719 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 RNF216Q9NWF9 866 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-215ENST00000538176 DDX25Q9UHL0 483 aaKnown RBP24.22■■□□□ 1.47
CCDC78-215ENST00000538176 PTPRSQ13332 1948 aa24.22■■□□□ 1.47
CCDC78-215ENST00000538176 IGSF9BQ9UPX0 1349 aa24.21■■□□□ 1.47
CCDC78-215ENST00000538176 TMOD1P28289 359 aa24.21■■□□□ 1.47
CCDC78-215ENST00000538176 INF2Q27J81 1249 aa24.21■■□□□ 1.47
CCDC78-215ENST00000538176 FAM117BQ6P1L5 589 aa24.21■■□□□ 1.47
CCDC78-215ENST00000538176 SP7Q8TDD2 431 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-215ENST00000538176 YME1L1Q96TA2 773 aa24.21■■□□□ 1.47
CCDC78-215ENST00000538176 OSBPL7Q9BZF2 842 aa24.21■■□□□ 1.47
CCDC78-215ENST00000538176 LCHNA4D1U4 455 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 LINC01553A4QN01 128 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 DLL1O00548 723 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 ENPP3O14638 875 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 TBX3O15119 743 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 TDP2O95551 362 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 TRIM29Q14134 588 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 LETM2Q2VYF4 491 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 MIER3Q7Z3K6 550 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 KIAA0319LQ8IZA0 1049 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 NECAB1Q8N987 351 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 CERS4Q9HA82 394 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 LIMCH1Q9UPQ0 1083 aa24.2■■□□□ 1.46
CCDC78-215ENST00000538176 ZBTB42B2RXF5 422 aa24.19■■□□□ 1.46
CCDC78-215ENST00000538176 DKC1O60832 514 aaKnown RBP eCLIP24.19■■□□□ 1.46
CCDC78-215ENST00000538176 OATP04181 439 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms