RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PSPC1Q8WXF1 523 aaKnown RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 MKL1Q969V6 931 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 YME1L1Q96TA2 773 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 RSPH10B2B2RC85 870 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 EML1O00423 815 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 RSPH10BP0C881 870 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 FDX1P10109 184 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 CD19P15391 556 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 ITGA7Q13683 1181 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 NTRK3Q16288 839 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 CCDC60Q8IWA6 550 aaPredicted RBP8.01□□□□□ -1.13
MSH6-209ENST00000538136 CCDC65Q8IXS2 484 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 ABHD8Q96I13 439 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 ERAP1Q9NZ08 941 aa8.01□□□□□ -1.13
MSH6-209ENST00000538136 A0A087WZ62 844 aa8□□□□□ -1.13
MSH6-209ENST00000538136 TREHO43280 583 aa8□□□□□ -1.13
MSH6-209ENST00000538136 ACOT2P49753 483 aa8□□□□□ -1.13
MSH6-209ENST00000538136 LAMC2Q13753 1193 aa8□□□□□ -1.13
MSH6-209ENST00000538136 ZC2HC1CQ53FD0 456 aaPredicted RBP8□□□□□ -1.13
MSH6-209ENST00000538136 CPB2Q96IY4 423 aa8□□□□□ -1.13
MSH6-209ENST00000538136 FDXACB1Q9BRP7 624 aaPredicted RBP8□□□□□ -1.13
MSH6-209ENST00000538136 MYH13Q9UKX3 1938 aa8□□□□□ -1.13
MSH6-209ENST00000538136 POMCP01189 267 aa8□□□□□ -1.13
MSH6-209ENST00000538136 MMP14P50281 582 aa8□□□□□ -1.13
MSH6-209ENST00000538136 AP3B2Q13367 1082 aa8□□□□□ -1.13
MSH6-209ENST00000538136 RAPGEF1Q13905 1077 aa8□□□□□ -1.13
MSH6-209ENST00000538136 SYCP1Q15431 976 aa8□□□□□ -1.13
MSH6-209ENST00000538136 C17orf99Q6UX52 265 aa8□□□□□ -1.13
MSH6-209ENST00000538136 PCSK9Q8NBP7 692 aaKnown RBP8□□□□□ -1.13
MSH6-209ENST00000538136 LARP4BQ92615 738 aaKnown RBP8□□□□□ -1.13
MSH6-209ENST00000538136 CEP89Q96ST8 783 aa8□□□□□ -1.13
MSH6-209ENST00000538136 POLR3FQ9H1D9 316 aaPredicted RBP8□□□□□ -1.13
MSH6-209ENST00000538136 VPS16Q9H269 839 aa8□□□□□ -1.13
MSH6-209ENST00000538136 HIPK3Q9H422 1215 aa8□□□□□ -1.13
MSH6-209ENST00000538136 PANK4Q9NVE7 773 aa8□□□□□ -1.13
MSH6-209ENST00000538136 ZC3H11AO75152 810 aaKnown RBP eCLIP8□□□□□ -1.13
MSH6-209ENST00000538136 MRPS9P82933 396 aaKnown RBP8□□□□□ -1.13
MSH6-209ENST00000538136 TRIM60Q495X7 471 aa8□□□□□ -1.13
MSH6-209ENST00000538136 ERLEC1Q96DZ1 483 aa8□□□□□ -1.13
MSH6-209ENST00000538136 SENP7Q9BQF6 1050 aa8□□□□□ -1.13
MSH6-209ENST00000538136 UBE2OQ9C0C9 1292 aaKnown RBP8□□□□□ -1.13
MSH6-209ENST00000538136 ZMYND12Q9H0C1 365 aa8□□□□□ -1.13
MSH6-209ENST00000538136 RANBP17Q9H2T7 1088 aaKnown RBP8□□□□□ -1.13
MSH6-209ENST00000538136 SMARCAD1Q9H4L7 1026 aa8□□□□□ -1.13
MSH6-209ENST00000538136 TBC1D22BQ9NU19 505 aa8□□□□□ -1.13
MSH6-209ENST00000538136 ZNF112Q9UJU3 913 aa8□□□□□ -1.13
MSH6-209ENST00000538136 CTNND2Q9UQB3 1225 aa8□□□□□ -1.13
MSH6-209ENST00000538136 TJP1Q07157 1748 aa8□□□□□ -1.13
MSH6-209ENST00000538136 C17orf102A2RUQ5 167 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 AKAP5P24588 427 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 KRT76Q01546 638 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 AMHR2Q16671 573 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 ARMCX5Q6P1M9 558 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 PHLDB2Q86SQ0 1253 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 NACC1Q96RE7 527 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 TSG101Q99816 390 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 FOXP1Q9H334 677 aaPredicted RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 ST7Q9NRC1 585 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 UBR3Q6ZT12 1888 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 ARFGEF2Q9Y6D5 1785 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 SYNJ2BP-COX16A0A087WUM0 186 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 MACROD2A1Z1Q3 448 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 GNAT1P11488 350 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 HOXA7P31268 230 aaPredicted RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 ARHGAP44Q17R89 818 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 CCAR2Q8N163 923 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 INTS4Q96HW7 963 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 COX16Q9P0S2 106 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 DDX20Q9UHI6 824 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 LGALS2P05162 132 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 P4HBP07237 508 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 KRT13P13646 458 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 PDIA4P13667 645 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 CD58P19256 250 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 GJC1P36383 396 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 OR1G1P47890 313 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 ST3GAL1Q11201 340 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 TRPC3Q13507 836 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 MFSD10Q14728 455 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 CLUL1Q15846 466 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 PTPROQ16827 1216 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 TDRD12Q587J7 1177 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 FBXO46Q6PJ61 603 aaPredicted RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 CHRDL2Q6WN34 429 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 SLAIN1Q8ND83 568 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 PRPF31Q8WWY3 499 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 SNX21Q969T3 373 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 TARS2Q9BW92 718 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 RPTORQ8N122 1335 aa7.99□□□□□ -1.13
MSH6-209ENST00000538136 BAZ2AQ9UIF9 1905 aaKnown RBP7.99□□□□□ -1.13
MSH6-209ENST00000538136 HSPA8P11142 646 aaKnown RBP7.98□□□□□ -1.13
MSH6-209ENST00000538136 KRT5P13647 590 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 PSMC5P62195 406 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 SP2Q02086 613 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 ZNF568Q3ZCX4 644 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 CACNA2D4Q7Z3S7 1137 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 USP37Q86T82 979 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 SFR1Q86XK3 245 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms