RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 DQX1Q8TE96 717 aaKnown RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 SNX27Q96L92 541 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 PCMTD1Q96MG8 357 aaPredicted RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 CDK19Q9BWU1 502 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 TTYH3Q9C0H2 523 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 PFDN4Q9NQP4 134 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ZNF180Q9UJW8 692 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 HPS5Q9UPZ3 1129 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ZNF711Q9Y462 761 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 STK24Q9Y6E0 443 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 CES2O00748 559 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 SRGNP10124 158 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 TRPC1P48995 793 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 KIF11P52732 1056 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 RC3H1Q5TC82 1133 aaKnown RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 TAF4BQ92750 862 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 GRAMD1AQ96CP6 724 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 MPP4Q96JB8 637 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ZNF184Q99676 751 aaPredicted RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 UBAC1Q9BSL1 405 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 ADAM7Q9H2U9 754 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 PHAXQ9H814 394 aaKnown RBP9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 FGFR1OP2Q9NVK5 253 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 PTTG2Q9NZH5 202 aa9.23□□□□□ -0.93
SRGAP1-202ENST00000537556 TMEM94Q12767 1356 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 NUDT17P0C025 328 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 GM2AP17900 193 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 IARSP41252 1262 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 ACADVLP49748 655 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 RTP1P59025 263 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 ZCWPW2Q504Y3 356 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 UNC13DQ70J99 1090 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 HS2ST1Q7LGA3 356 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 COL23A1Q86Y22 540 aaPredicted RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 EDC3Q96F86 508 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 INIPQ9NRY2 104 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 PRKAG3Q9UGI9 489 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 SEC63Q9UGP8 760 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 TMEM59LQ9UK28 342 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 TCP11X1B4DZS4 312 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 CYP1A1P04798 512 aaPredicted RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 ETS2P15036 469 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 HNRNPH3P31942 346 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 GRIN1Q05586 938 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 SLC34A1Q06495 639 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 AP1B1Q10567 949 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 DCTN2Q13561 401 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 ACVR2BQ13705 512 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 EIF4A2Q14240 407 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 LRRC74BQ6ZQY2 392 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 INPP4AQ96PE3 977 aaPredicted RBP9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 PLAGL2Q9UPG8 496 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 DIP2CQ9Y2E4 1556 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 PTPRMP28827 1452 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 BCL9LQ86UU0 1499 aa9.22□□□□□ -0.93
SRGAP1-202ENST00000537556 SIGLEC1Q9BZZ2 1709 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 WNT7AO00755 349 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 UBTFL6P0CB48 400 aaPredicted RBP9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 ZCCHC18P0CG32 403 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 GEMIN4P57678 1058 aaKnown RBP9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 ARPC4P59998 168 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 ITGA7Q13683 1181 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 PDCD4Q53EL6 469 aaKnown RBP9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 DAAM2Q86T65 1068 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 MTFR1LQ9H019 292 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 CSRNP2Q9H175 543 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 STRN4Q9NRL3 753 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 BABAM1Q9NWV8 329 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 ARHGEF38Q9NXL2 777 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 DDX43Q9NXZ2 648 aaKnown RBP9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 AIPL1Q9NZN9 384 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 FER1L4A9Z1Z3 1794 aa9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 EDC4Q6P2E9 1401 aaKnown RBP9.21□□□□□ -0.93
SRGAP1-202ENST00000537556 MYH10P35580 1976 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 TLDC2A0PJX2 215 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 PI4KAP2A4QPH2 592 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 CCDC188H7C350 402 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 ENTPD5O75356 428 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 CAPN15O75808 1086 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 SPATA31D3P0C874 917 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 CPA3P15088 417 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 MARK3P27448 753 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 SPIDRQ14159 915 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 KRT72Q14CN4 511 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 CNGA2Q16280 664 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 CCDC153Q494R4 210 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 ZC2HC1CQ53FD0 456 aaPredicted RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 ZNF658Q5TYW1 1059 aaPredicted RBP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 DENND2CQ68D51 928 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 TYW1BQ6NUM6 668 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 SPATA31D4Q6ZUB0 917 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 DDX42Q86XP3 938 aaKnown RBP eCLIP9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 PI4KAP1Q8N8J0 262 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 NEK9Q8TD19 979 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 AIFM3Q96NN9 605 aa9.21□□□□□ -0.94
SRGAP1-202ENST00000537556 HNRNPABQ99729 332 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms