RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SNRPFP62306 86 aaKnown RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 CTTNQ14247 550 aaKnown RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 TKFCQ3LXA3 575 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 SFMBT2Q5VUG0 894 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 RSRC2Q7L4I2 434 aaKnown RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 RRAGAQ7L523 313 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 MIER3Q7Z3K6 550 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 MYCT1Q8N699 235 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 ZNF280CQ8ND82 737 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 TRIM58Q8NG06 486 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 SYTL5Q8TDW5 730 aaPredicted RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 BAP1Q92560 729 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 KCNH7Q9NS40 1196 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 GUCA1BQ9UMX6 200 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 MYPNQ86TC9 1320 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 AKR1B10O60218 316 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 DKC1O60832 514 aaKnown RBP eCLIP14.93□□□□□ -0.023e-6■■■■■ 27.9
SMG6-203ENST00000536871 ARP10275 920 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 ALAS1P13196 640 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 KLK7P49862 253 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 JAK3P52333 1124 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 CHMP4BP1P59074 171 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 HERVK_113P62684 666 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 FAM193AP78312 1265 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 RAD51AP2Q09MP3 1159 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 KCNMA1Q12791 1236 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 TMEM174Q8WUU8 243 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 BBXQ8WY36 941 aaPredicted RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 PURBQ96QR8 312 aaKnown RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 LXNQ9BS40 222 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 RPAP3Q9H6T3 665 aaPredicted RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 OGFRQ9NZT2 677 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 ATAD5Q96QE3 1844 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 LRRC53A6NM62 1247 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 CHMP2AO43633 222 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 NR3C1P04150 777 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 TAL1P17542 331 aaPredicted RBP14.92□□□□□ -0.02
SMG6-203ENST00000536871 ITGB5P18084 799 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 PSMC2P35998 433 aaKnown RBP14.92□□□□□ -0.02
SMG6-203ENST00000536871 KIF11P52732 1056 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 CKAP4Q07065 602 aaKnown RBP14.92□□□□□ -0.02
SMG6-203ENST00000536871 KCNH2Q12809 1159 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 MTMR1Q13613 665 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 MTMR2Q13614 643 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 C10orf76Q5T2E6 689 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 FAM178BQ8IXR5 827 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 UIMC1Q96RL1 719 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 IWS1Q96ST2 819 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 FGFBP2Q9BYJ0 223 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 IFIH1Q9BYX4 1025 aaKnown RBP14.92□□□□□ -0.02
SMG6-203ENST00000536871 IRX2Q9BZI1 471 aaPredicted RBP14.92□□□□□ -0.02
SMG6-203ENST00000536871 AGO4Q9HCK5 861 aaKnown RBP14.92□□□□□ -0.02
SMG6-203ENST00000536871 LARSQ9P2J5 1176 aaKnown RBP14.92□□□□□ -0.02
SMG6-203ENST00000536871 GJA3Q9Y6H8 435 aa14.92□□□□□ -0.02
SMG6-203ENST00000536871 RBAK-RBAKDNI3L0D1 243 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 NFIBO00712 420 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 ATP2A1O14983 1001 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 PJA2O43164 708 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 TACC1O75410 805 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 STAM2O75886 525 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 KRT76Q01546 638 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 GABPB1Q06547 395 aaPredicted RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 NAA30Q147X3 362 aaPredicted RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 SUPT20HL1Q3ZLR7 823 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 NOL9Q5SY16 702 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 PAPD7Q5XG87 772 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 IQCEQ6IPM2 695 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 FBXO38Q6PIJ6 1188 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 RNF207Q6ZRF8 634 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 SAMD7Q7Z3H4 446 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 LOXHD1Q8IVV2 1947 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 CPXCR1Q8N123 301 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 RNF10Q8N5U6 811 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 PIGOQ8TEQ8 1089 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 SECISBP2LQ93073 1101 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 ALS2CR12Q96Q35 445 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 SGIP1Q9BQI5 828 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 LSM14BQ9BX40 385 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 TMEM206Q9H813 350 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 RAVER2Q9HCJ3 691 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 AIPL1Q9NZN9 384 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 ARHGAP20Q9P2F6 1191 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 CTAGE15A4D2H0 777 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 VWA5AO00534 786 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 PRPF6O94906 941 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 CTAGE8P0CG41 777 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 MYBP10242 640 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 QARSP47897 775 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 CASP5P51878 434 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 SPP2Q13103 211 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 BMS1Q14692 1282 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 PPP2R5AQ15172 486 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 TBC1D10BQ4KMP7 808 aaPredicted RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 TMCO3Q6UWJ1 677 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 ZNF720Q7Z2F6 126 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 CTAGE6Q86UF2 777 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms