RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 ANKRD20A3Q5VUR7 823 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 ARHGAP27Q6ZUM4 889 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 SH3RF3Q8TEJ3 882 aaPredicted RBP17.01■□□□□ 0.31
CHFR-213ENST00000536843 CCDC134Q9H6E4 229 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 SAMD15Q9P1V8 674 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 DLEC1Q9Y238 1755 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 MPHOSPH10O00566 681 aaKnown RBP17.01■□□□□ 0.31
CHFR-213ENST00000536843 LDHBP07195 334 aaKnown RBP17.01■□□□□ 0.31
CHFR-213ENST00000536843 MMEP08473 750 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 FLT3P36888 993 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 DNA2P51530 1060 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 ZNF131P52739 623 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 NLRP5P59047 1200 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 KCNJ2P63252 427 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 EHHADHQ08426 723 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 GRAPQ13588 217 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 NFIXQ14938 502 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 FAM133BQ5BKY9 247 aaKnown RBP17.01■□□□□ 0.31
CHFR-213ENST00000536843 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
CHFR-213ENST00000536843 DDX42Q86XP3 938 aaKnown RBP eCLIP17.01■□□□□ 0.31
CHFR-213ENST00000536843 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
CHFR-213ENST00000536843 ABCB11O95342 1321 aa17■□□□□ 0.31
CHFR-213ENST00000536843 RTN3O95197 1032 aaPredicted RBP17■□□□□ 0.31
CHFR-213ENST00000536843 RARAP10276 462 aa17■□□□□ 0.31
CHFR-213ENST00000536843 ATP4AP20648 1035 aa17■□□□□ 0.31
CHFR-213ENST00000536843 KIAA0753Q2KHM9 967 aa17■□□□□ 0.31
CHFR-213ENST00000536843 C12orf60Q5U649 245 aa17■□□□□ 0.31
CHFR-213ENST00000536843 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
CHFR-213ENST00000536843 STXBP3O00186 592 aa17■□□□□ 0.31
CHFR-213ENST00000536843 CHN1P15882 459 aa17■□□□□ 0.31
CHFR-213ENST00000536843 MMP13P45452 471 aa17■□□□□ 0.31
CHFR-213ENST00000536843 PAPOLAP51003 745 aaKnown RBP17■□□□□ 0.31
CHFR-213ENST00000536843 RNASE9P60153 205 aaKnown RBP17■□□□□ 0.31
CHFR-213ENST00000536843 ROR2Q01974 943 aaKnown RBP17■□□□□ 0.31
CHFR-213ENST00000536843 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
CHFR-213ENST00000536843 PFKFB3Q16875 520 aaPredicted RBP17■□□□□ 0.31
CHFR-213ENST00000536843 COBLL1Q53SF7 1204 aa17■□□□□ 0.31
CHFR-213ENST00000536843 APLFQ8IW19 511 aaPredicted RBP17■□□□□ 0.31
CHFR-213ENST00000536843 WDR66Q8TBY9 1149 aa17■□□□□ 0.31
CHFR-213ENST00000536843 ACTRT1Q8TDG2 376 aa17■□□□□ 0.31
CHFR-213ENST00000536843 SEC14L1Q92503 715 aa17■□□□□ 0.31
CHFR-213ENST00000536843 MMRN2Q9H8L6 949 aa17■□□□□ 0.31
CHFR-213ENST00000536843 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
CHFR-213ENST00000536843 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
CHFR-213ENST00000536843 BAZ2BQ9UIF8 2168 aaKnown RBP16.99■□□□□ 0.31
CHFR-213ENST00000536843 MYH7BA7E2Y1 1941 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 TNRC6CQ9HCJ0 1690 aaKnown RBP16.99■□□□□ 0.31
CHFR-213ENST00000536843 ATP2A2P16615 1042 aaKnown RBP16.99■□□□□ 0.31
CHFR-213ENST00000536843 SNX1Q13596 522 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 GALNTL6Q49A17 601 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 HOOK3Q86VS8 718 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 ERICH1Q86X53 443 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 LRRC34Q8IZ02 419 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 DRAXINQ8NBI3 349 aaPredicted RBP16.99■□□□□ 0.31
CHFR-213ENST00000536843 TAF4BQ92750 862 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 PBKQ96KB5 322 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 PACSIN2Q9UNF0 486 aaPredicted RBP16.99■□□□□ 0.31
CHFR-213ENST00000536843 ABLIM1O14639 778 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 KLRC1P26715 233 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 RXRBP28702 533 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 MAN2A1Q16706 1144 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 TMED8Q6PL24 325 aaPredicted RBP16.99■□□□□ 0.31
CHFR-213ENST00000536843 OSBPL1AQ9BXW6 950 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 NUCKS1Q9H1E3 243 aaKnown RBP16.99■□□□□ 0.31
CHFR-213ENST00000536843 MAGEF1Q9HAY2 307 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 ABCF3Q9NUQ8 709 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 PNMA2Q9UL42 364 aa16.99■□□□□ 0.31
CHFR-213ENST00000536843 UBOX5O94941 541 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 CCDC38Q502W7 563 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 SPICE1Q8N0Z3 855 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 SYN2Q92777 582 aaPredicted RBP16.98■□□□□ 0.31
CHFR-213ENST00000536843 CCSER1Q9C0I3 900 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 PAPOLBQ9NRJ5 636 aaKnown RBP16.98■□□□□ 0.31
CHFR-213ENST00000536843 KIAA1551Q9HCM1 1747 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 IGF2BP3O00425 579 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHFR-213ENST00000536843 GCLCP48506 637 aaPredicted RBP16.98■□□□□ 0.31
CHFR-213ENST00000536843 SLC9C1Q4G0N8 1177 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 GBP7Q8N8V2 638 aaPredicted RBP16.98■□□□□ 0.31
CHFR-213ENST00000536843 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 ZFAND2BQ8WV99 257 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 TSC22D3Q99576 134 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 ELAC2Q9BQ52 826 aaKnown RBP16.98■□□□□ 0.31
CHFR-213ENST00000536843 TXLNGYQ9BZA5 131 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 NSRP1Q9H0G5 558 aaKnown RBP16.98■□□□□ 0.31
CHFR-213ENST00000536843 ADAM7Q9H2U9 754 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 ECT2Q9H8V3 914 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 LRRC4CQ9HCJ2 640 aa16.98■□□□□ 0.31
CHFR-213ENST00000536843 LAMB1P07942 1786 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 USP17L3A6NCW0 530 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 USP17L4A6NCW7 530 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 CCDC188H7C350 402 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 PPFIA2O75334 1257 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 WFS1O76024 890 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 SERPING1P05155 500 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 KIF5BP33176 963 aa16.97■□□□□ 0.31
CHFR-213ENST00000536843 CTCFP49711 727 aaPredicted RBP16.97■□□□□ 0.31
CHFR-213ENST00000536843 DHX9Q08211 1270 aaKnown RBP16.97■□□□□ 0.31
CHFR-213ENST00000536843 PDE4DQ08499 809 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms