RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 TEX13AQ9BXU3 409 aaPredicted RBP5.34□□□□□ -1.55
YBX3-205ENST00000536107 ASCC2Q9H1I8 757 aaPredicted RBP5.34□□□□□ -1.55
YBX3-205ENST00000536107 TNFRSF12AQ9NP84 129 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 FAM8A1Q9UBU6 413 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 SUSD2Q9UGT4 822 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 TCFL5Q9UL49 500 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 CACNA1SQ13698 1873 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 RBBP6Q7Z6E9 1792 aaKnown RBP5.34□□□□□ -1.56
YBX3-205ENST00000536107 MUC3AQ02505 3323 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 A0A1B0GTL3 188 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 FADS2P1A8MWK0 482 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 NUDT19A8MXV4 375 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 UPK3BL1B0FP48 263 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 UPK3BL2E5RIL1 263 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 TREHO43280 583 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 NOBOXO60393 691 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 A1BGP04217 495 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 PCBP3P57721 371 aaKnown RBP5.33□□□□□ -1.56
YBX3-205ENST00000536107 NMIQ13287 307 aaPredicted RBP5.33□□□□□ -1.56
YBX3-205ENST00000536107 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 CRY2Q49AN0 593 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 HSF5Q4G112 596 aaPredicted RBP5.33□□□□□ -1.56
YBX3-205ENST00000536107 TMEM31Q5JXX7 168 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 CLEC4GQ6UXB4 293 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 SLFN12Q8IYM2 578 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 PPM1EQ8WY54 764 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 C8orf49Q96NF6 230 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 CRAMP1Q96RY5 1269 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 LRFN3Q9BTN0 628 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 LNPKQ9C0E8 428 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 NYXQ9GZU5 481 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 DBNDD1Q9H9R9 158 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 ATP6V0A2Q9Y487 856 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 TAF6LQ9Y6J9 622 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 PIEZO1Q92508 2521 aa5.33□□□□□ -1.56
YBX3-205ENST00000536107 SNED1Q8TER0 1413 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 TJP1Q07157 1748 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 KIF7Q2M1P5 1343 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 EYSQ5T1H1 3165 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 SGPL1O95470 568 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 PIP4K2AP48426 406 aaPredicted RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 TNNI2P48788 182 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 RPL6Q02878 288 aaKnown RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 EIF4A2Q14240 407 aaKnown RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 TARBP2Q15633 366 aaKnown RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 TSNAXIP1Q2TAA8 658 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 TMEM201Q5SNT2 666 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 RPTNQ6XPR3 784 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 NECAB2Q7Z6G3 386 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 ZNF655Q8N720 491 aaPredicted RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 DDX1Q92499 740 aaKnown RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 TCTN2Q96GX1 697 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 PAWRQ96IZ0 340 aaKnown RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 WNK4Q96J92 1243 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 FCRL2Q96LA5 508 aaPredicted RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 RTFDC1Q9BY42 306 aaPredicted RBP5.32□□□□□ -1.56
YBX3-205ENST00000536107 C12orf49Q9H741 205 aa5.32□□□□□ -1.56
YBX3-205ENST00000536107 NCAPD2Q15021 1401 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 SSU72P8A0A1W2PR75 194 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
YBX3-205ENST00000536107 USP17L7P0C7H9 530 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 ZBTB48P10074 688 aaPredicted RBP5.31□□□□□ -1.56
YBX3-205ENST00000536107 HOXD10P28358 340 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 MAPKAPK2P49137 400 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 PRMT2P55345 433 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 CYP4F8P98187 520 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 NR1I3Q14994 352 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 TAF1CQ15572 869 aaPredicted RBP5.31□□□□□ -1.56
YBX3-205ENST00000536107 PLEKHN1Q494U1 663 aaPredicted RBP5.31□□□□□ -1.56
YBX3-205ENST00000536107 ZC3H14Q6PJT7 736 aaKnown RBP5.31□□□□□ -1.56
YBX3-205ENST00000536107 AGMOQ6ZNB7 445 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 ZFPM1Q8IX07 1006 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 ATXN2LQ8WWM7 1075 aaKnown RBP5.31□□□□□ -1.56
YBX3-205ENST00000536107 ASB2Q96Q27 587 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 ARHGAP39Q9C0H5 1083 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 MIR1-1HGQ9H1L0 117 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 ACSL6Q9UKU0 697 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 TTF2Q9UNY4 1162 aaKnown RBP5.31□□□□□ -1.56
YBX3-205ENST00000536107 RIPOR2Q9Y4F9 1068 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 PRUNE2Q8WUY3 3088 aa5.31□□□□□ -1.56
YBX3-205ENST00000536107 LAMB4A4D0S4 1761 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 ARFGEF2Q9Y6D5 1785 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 ECE2O60344 883 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 PRKCAP17252 672 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 PLCG1P19174 1290 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 GJA9P57773 515 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 MRPS5P82675 430 aaKnown RBP5.3□□□□□ -1.56
YBX3-205ENST00000536107 FOXO4P98177 505 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 ZNF200P98182 395 aaPredicted RBP5.3□□□□□ -1.56
YBX3-205ENST00000536107 BBS9Q3SYG4 887 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 CRIP3Q6Q6R5 217 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 ZPBP2Q6X784 338 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 USP38Q8NB14 1042 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 LOXL4Q96JB6 756 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 CCDC74BQ96LY2 380 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 DEFB118Q96PH6 123 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 LBHD1Q9BQE6 289 aaPredicted RBP5.3□□□□□ -1.56
YBX3-205ENST00000536107 MYOZ2Q9NPC6 264 aa5.3□□□□□ -1.56
YBX3-205ENST00000536107 KCNQ5Q9NR82 932 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms