RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.6■■□□□ 1.53
SSPN-204ENST00000535504 ZBBXA8MT70 800 aa24.59■■□□□ 1.53
SSPN-204ENST00000535504 C9orf50Q5SZB4 431 aa24.59■■□□□ 1.53
SSPN-204ENST00000535504 ZNF365Q70YC5 407 aa24.59■■□□□ 1.53
SSPN-204ENST00000535504 GJA10Q969M2 543 aa24.59■■□□□ 1.53
SSPN-204ENST00000535504 PCDHA12Q9UN75 941 aa24.59■■□□□ 1.53
SSPN-204ENST00000535504 IGSF9BQ9UPX0 1349 aa24.59■■□□□ 1.53
SSPN-204ENST00000535504 TANC1Q9C0D5 1861 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 OATP04181 439 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 CUL4AQ13619 759 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 TTC38Q5R3I4 469 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 TMEM240Q5SV17 173 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 ZNF618Q5T7W0 954 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 NCAPH2Q6IBW4 605 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 CTAGE1Q96RT6 745 aa24.58■■□□□ 1.53
SSPN-204ENST00000535504 MBLAC1A4D2B0 266 aaPredicted RBP24.57■■□□□ 1.52
SSPN-204ENST00000535504 U2AF2P26368 475 aaKnown RBP eCLIP24.57■■□□□ 1.52
SSPN-204ENST00000535504 EPHB4P54760 987 aa24.57■■□□□ 1.52
SSPN-204ENST00000535504 PSMC5P62195 406 aa24.57■■□□□ 1.52
SSPN-204ENST00000535504 PRKCEQ02156 737 aa24.57■■□□□ 1.52
SSPN-204ENST00000535504 TMEM266Q2M3C6 531 aa24.57■■□□□ 1.52
SSPN-204ENST00000535504 IER5Q5VY09 327 aa24.57■■□□□ 1.52
SSPN-204ENST00000535504 INTS4Q96HW7 963 aaKnown RBP24.57■■□□□ 1.52
SSPN-204ENST00000535504 MAGEB2O15479 319 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 CTSHP09668 335 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 TMOD1P28289 359 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 TXKP42681 527 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 ADAM17P78536 824 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 HIC1Q14526 733 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 TRIM71Q2Q1W2 868 aaKnown RBP24.56■■□□□ 1.52
SSPN-204ENST00000535504 MTHFD1LQ6UB35 978 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 OTOP2Q7RTS6 562 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 HERVK_113Q902F9 699 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 SNX21Q969T3 373 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 FAM49AQ9H0Q0 323 aaPredicted RBP24.56■■□□□ 1.52
SSPN-204ENST00000535504 TTC12Q9H892 705 aaPredicted RBP24.56■■□□□ 1.52
SSPN-204ENST00000535504 SEPT9Q9UHD8 586 aaPredicted RBP24.56■■□□□ 1.52
SSPN-204ENST00000535504 PCDHA2Q9Y5H9 948 aa24.56■■□□□ 1.52
SSPN-204ENST00000535504 EFCAB14O75071 495 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 P4HBP07237 508 aaKnown RBP24.55■■□□□ 1.52
SSPN-204ENST00000535504 KCNJ6P48051 423 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 EPHA7Q15375 998 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 ZNF174Q15697 407 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 RILPL1Q5EBL4 403 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 XKR3Q5GH77 459 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 RPAINQ86UA6 219 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 NME8Q8N427 588 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 HAS1Q92839 578 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 VAV3Q9UKW4 847 aa24.55■■□□□ 1.52
SSPN-204ENST00000535504 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.54■■□□□ 1.52
SSPN-204ENST00000535504 SMIM35A0A1B0GVV1 85 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.54■■□□□ 1.52
SSPN-204ENST00000535504 BAIAP3O94812 1187 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 OR52Z1P0C646 297 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 KLRC1P26715 233 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 QARSP47897 775 aaKnown RBP24.54■■□□□ 1.52
SSPN-204ENST00000535504 CNKSR3Q6P9H4 555 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 METTL13Q8N6R0 699 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 BANK1Q8NDB2 785 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 ERMNQ8TAM6 284 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 NEK9Q8TD19 979 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 DNAJB3Q8WWF6 145 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 CCDC43Q96MW1 224 aaKnown RBP24.54■■□□□ 1.52
SSPN-204ENST00000535504 MAP7D2Q96T17 732 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 RAB34Q9BZG1 259 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 SLC4A7Q9Y6M7 1214 aa24.54■■□□□ 1.52
SSPN-204ENST00000535504 VPS37CA5D8V6 355 aaPredicted RBP24.53■■□□□ 1.52
SSPN-204ENST00000535504 KIF28PB7ZC32 967 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 TBC1D8BQ0IIM8 1120 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 RUFY4Q6ZNE9 571 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 OTUD6AQ7L8S5 288 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 EXOC8Q8IYI6 725 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 TRAPPC12Q8WVT3 735 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 SEPT8Q92599 483 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 WNT8BQ93098 351 aa24.53■■□□□ 1.52
SSPN-204ENST00000535504 JPH2Q9BR39 696 aaPredicted RBP24.53■■□□□ 1.52
SSPN-204ENST00000535504 DDX11L8A8MPP1 907 aa24.52■■□□□ 1.52
SSPN-204ENST00000535504 FXR1P51114 621 aaKnown RBP eCLIP24.52■■□□□ 1.52
SSPN-204ENST00000535504 MRPS6P82932 125 aaKnown RBP24.52■■□□□ 1.52
SSPN-204ENST00000535504 IKBKEQ14164 716 aa24.52■■□□□ 1.52
SSPN-204ENST00000535504 MARCH8Q5T0T0 291 aa24.52■■□□□ 1.52
SSPN-204ENST00000535504 B3GNT9Q6UX72 402 aa24.52■■□□□ 1.52
SSPN-204ENST00000535504 C16orf59Q7L2K0 433 aa24.52■■□□□ 1.52
SSPN-204ENST00000535504 LAD1O00515 517 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 CXCL10P02778 98 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 SMAD3P84022 425 aaKnown RBP24.51■■□□□ 1.51
SSPN-204ENST00000535504 BRAPQ7Z569 592 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 ZNF710Q8N1W2 664 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 APBB2Q92870 758 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 ZSWIM4Q9H7M6 989 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 PPME1Q9Y570 386 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 TRPV2Q9Y5S1 764 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 STK24Q9Y6E0 443 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 SCN5AQ14524 2016 aa24.51■■□□□ 1.51
SSPN-204ENST00000535504 EML1O00423 815 aa24.5■■□□□ 1.51
SSPN-204ENST00000535504 NBNO60934 754 aa24.5■■□□□ 1.51
SSPN-204ENST00000535504 ATP4AP20648 1035 aa24.5■■□□□ 1.51
SSPN-204ENST00000535504 DNM2P50570 870 aa24.5■■□□□ 1.51
SSPN-204ENST00000535504 UGCGQ16739 394 aa24.5■■□□□ 1.51
SSPN-204ENST00000535504 MTERF2Q49AM1 385 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms