RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 U2AF1L4Q8WU68 220 aaKnown RBP14.63□□□□□ -0.07
HDAC4-214ENST00000535493 RAB34Q9BZG1 259 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 KCTD10Q9H3F6 313 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 CHUKO15111 745 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 GFPT2O94808 682 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 TAL1P17542 331 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-214ENST00000535493 RFC4P35249 363 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 PABPC4Q13310 644 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC4-214ENST00000535493 ANKRD20A8PQ5CZ79 823 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 KCTD1Q719H9 257 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 TMC3Q7Z5M5 1100 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 YTHDF3Q7Z739 585 aaKnown RBP14.63□□□□□ -0.07
HDAC4-214ENST00000535493 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.63□□□□□ -0.077e-8■■□□□ 11.5
HDAC4-214ENST00000535493 BMP2KQ9NSY1 1161 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-214ENST00000535493 PCDHA2Q9Y5H9 948 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 ABCB11O95342 1321 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 SLCO1A2P46721 670 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 SCTRP47872 440 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 ARSHQ5FYA8 562 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 PROM2Q8N271 834 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 N4BP2L2Q92802 583 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-214ENST00000535493 LZTS2Q9BRK4 669 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 EDEM3Q9BZQ6 932 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 TPX2Q9ULW0 747 aaKnown RBP14.62□□□□□ -0.07
HDAC4-214ENST00000535493 RTCBQ9Y3I0 505 aaKnown RBP14.62□□□□□ -0.07
HDAC4-214ENST00000535493 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 RSPH10B2B2RC85 870 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 HGSO14964 777 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-214ENST00000535493 CTNND1O60716 968 aaKnown RBP14.62□□□□□ -0.07
HDAC4-214ENST00000535493 RSPH10BP0C881 870 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 PON1P27169 355 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 PDIA5Q14554 519 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 EXOC3L4Q17RC7 722 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 EMC10Q5UCC4 262 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 SPATS2Q86XZ4 545 aaKnown RBP14.62□□□□□ -0.07
HDAC4-214ENST00000535493 PARP9Q8IXQ6 854 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 GIMAP7Q8NHV1 300 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 NEDD1Q8NHV4 660 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 SYN2Q92777 582 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-214ENST00000535493 LRRC45Q96CN5 670 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 SELENOSQ9BQE4 189 aa14.62□□□□□ -0.07
HDAC4-214ENST00000535493 KIAA1551Q9HCM1 1747 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 F8W031 263 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-214ENST00000535493 CETN3O15182 167 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 PPP1R12BO60237 982 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-214ENST00000535493 MED24O75448 989 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 AKAP3O75969 853 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 CYP11B2P19099 503 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 IFNAR2P48551 515 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 SNAP25P60880 206 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 CYP4A11Q02928 519 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 DDR1Q08345 913 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 PSMD2Q13200 908 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 AMIGO3Q86WK7 504 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 KSR1Q8IVT5 923 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 ARFGAP2Q8N6H7 521 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 NUCKS1Q9H1E3 243 aaKnown RBP14.61□□□□□ -0.07
HDAC4-214ENST00000535493 ERVK-5Q9HDB9 667 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.61□□□□□ -0.073e-7■■■■■ 249
HDAC4-214ENST00000535493 SEPT11Q9NVA2 429 aaKnown RBP14.61□□□□□ -0.07
HDAC4-214ENST00000535493 PPP1R9AQ9ULJ8 1098 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 CUL1Q13616 776 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 GLYCTKQ8IVS8 523 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 ADGRF4Q8IZF3 695 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 SETDB2Q96T68 719 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 RTFDC1Q9BY42 306 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-214ENST00000535493 ARMCX3Q9UH62 379 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-214ENST00000535493 SNED1Q8TER0 1413 aa14.61□□□□□ -0.07
HDAC4-214ENST00000535493 SPDYE3A6NKU9 549 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L10C9JJH3 530 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 F8VZ95 297 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 DDX3XO00571 662 aaKnown RBP eCLIP14.6□□□□□ -0.07
HDAC4-214ENST00000535493 AKR1B1P15121 316 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 POLD1P28340 1107 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 HOXD13P35453 343 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 PLTPP55058 493 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 CCDC38Q502W7 563 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 CCDC65Q8IXS2 484 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 ACTRT1Q8TDG2 376 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 PAGR1Q9BTK6 254 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 RIOX1Q9H6W3 641 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 TMOD4Q9NZQ9 345 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 ODF2LQ9ULJ1 636 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 SUFUQ9UMX1 484 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 SNX24Q9Y343 169 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 IGSF9BQ9UPX0 1349 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 BUB1BO60566 1050 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-214ENST00000535493 ZBTB48P10074 688 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-214ENST00000535493 IFI35P80217 286 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-214ENST00000535493 SNCBQ16143 134 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 DPY19L2P1Q6NXN4 242 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 DPP8Q6V1X1 898 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-214ENST00000535493 C16orf86Q6ZW13 317 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 HVCN1Q96D96 273 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 CCDC113Q9H0I3 377 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 JMJD4Q9H9V9 463 aa14.6□□□□□ -0.07
HDAC4-214ENST00000535493 ATXN2Q99700 1313 aaKnown RBP14.6□□□□□ -0.07
HDAC4-214ENST00000535493 FOXO6A8MYZ6 492 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 GALCP54803 685 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms