RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PRRC2BQ5JSZ5 2229 aaKnown RBP15.04■□□□□ -0
CLSTN3-205ENST00000535452 COL1A2P08123 1366 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 ENPP3O14638 875 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 CPLX1O14810 134 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 GPR182O15218 404 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 RPS6KA5O75582 802 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 PSAPP07602 524 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 CD52P31358 61 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 BMPR1AP36894 532 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 EXOSC10Q01780 885 aaKnown RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 TMEM62Q0P6H9 643 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 PLCB4Q15147 1175 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 NAALADL2Q58DX5 795 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 Q6ZUG5 572 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 SPRED2Q7Z698 418 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 SMAP1Q8IYB5 467 aaPredicted RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 CMTR2Q8IYT2 770 aaKnown RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 ZNF710Q8N1W2 664 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 ATP8B4Q8TF62 1192 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 BRF1Q92994 677 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 PABPC5Q96DU9 382 aaKnown RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 FAM122AQ96E09 287 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 FAM167AQ96KS9 214 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 SCLT1Q96NL6 688 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 MAP7D2Q96T17 732 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 POP1Q99575 1024 aaKnown RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 UPF3BQ9BZI7 483 aaKnown RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 C1orf112Q9NSG2 853 aa15.03■□□□□ -0
CLSTN3-205ENST00000535452 COL4A4P53420 1690 aaPredicted RBP15.03■□□□□ -0
CLSTN3-205ENST00000535452 MICAL3Q7RTP6 2002 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 SIP14410 1827 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 ESYT2A0FGR8 921 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 FSD2A1L4K1 749 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 MEIS1O00470 390 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 NEFLP07196 543 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 SRGAP2BP0DMP2 458 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 ARP10275 920 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 KLRC1P26715 233 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 MGAT3Q09327 533 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 TCEAL5Q5H9L2 206 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 MTHFD1LQ6UB35 978 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 GJD3Q8N144 294 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 METTL13Q8N6R0 699 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 BBXQ8WY36 941 aaPredicted RBP15.02■□□□□ -0
CLSTN3-205ENST00000535452 BRPF3Q9ULD4 1205 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 PADI3Q9ULW8 664 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 PCDHB12Q9Y5F1 795 aa15.02■□□□□ -0
CLSTN3-205ENST00000535452 IGSF9BQ9UPX0 1349 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 C5orf67F2Z3F1 127 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 NLRP5P59047 1200 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 APOBRQ0VD83 1088 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 ZNF746Q6NUN9 644 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 SWSAP1Q6NVH7 229 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 ABI1Q8IZP0 508 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 CYP2W1Q8TAV3 490 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 MICAL1Q8TDZ2 1067 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 NRBP2Q9NSY0 501 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 TMEM260Q9NX78 707 aa15.01□□□□□ -0.01
CLSTN3-205ENST00000535452 TTC28Q96AY4 2481 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 WDR64B1ANS9 1081 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 H3BQ06 376 aaPredicted RBP15□□□□□ -0.01
CLSTN3-205ENST00000535452 MAGEB2O15479 319 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 HOXA2O43364 376 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 PRPF3O43395 683 aaKnown RBP15□□□□□ -0.01
CLSTN3-205ENST00000535452 DGKIO75912 1065 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 CSPG5O95196 566 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 CYP3A4P08684 503 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 ZSCAN20P17040 1043 aaPredicted RBP15□□□□□ -0.01
CLSTN3-205ENST00000535452 ADD1P35611 737 aaKnown RBP15□□□□□ -0.01
CLSTN3-205ENST00000535452 NDUFV1P49821 464 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 BMS1Q14692 1282 aaKnown RBP15□□□□□ -0.01
CLSTN3-205ENST00000535452 ADCK5Q3MIX3 580 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 PRR16Q569H4 304 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 MARCH8Q5T0T0 291 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 TRMT1LQ7Z2T5 733 aaKnown RBP15□□□□□ -0.01
CLSTN3-205ENST00000535452 P2RX5Q93086 422 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 SLC26A6Q9BXS9 759 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 RNF26Q9BY78 433 aaPredicted RBP15□□□□□ -0.01
CLSTN3-205ENST00000535452 ZMYND12Q9H0C1 365 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 PRKAG3Q9UGI9 489 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 TELO2Q9Y4R8 837 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 PCDHA10Q9Y5I2 948 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 COL4A6Q14031 1691 aa15□□□□□ -0.01
CLSTN3-205ENST00000535452 EYSQ5T1H1 3165 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 DOCK5Q9H7D0 1870 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 KDM3AQ9Y4C1 1321 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 TCF20Q9UGU0 1960 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 XBP1P17861 261 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 SARSP49591 514 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 ITGB3BPQ13352 177 aaPredicted RBP14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 PAN2Q504Q3 1202 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 TRAPPC12Q8WVT3 735 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 IGFLR1Q9H665 355 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 PUF60Q9UHX1 559 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 AKT3Q9Y243 479 aa14.99□□□□□ -0.01
CLSTN3-205ENST00000535452 PTPRSQ13332 1948 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms