RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SHHQ15465 462 aa25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 C9orf50Q5SZB4 431 aa25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 LRRC8DQ7L1W4 858 aa25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 CKAP2LQ8IYA6 745 aa25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 TRAPPC12Q8WVT3 735 aa25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 BBXQ8WY36 941 aaPredicted RBP25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 ZBTB10Q96DT7 871 aa25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 ACRP10323 421 aa25.57■■□□□ 1.68
SFSWAP-204ENST00000535399 PDCP20941 246 aa25.57■■□□□ 1.68
SFSWAP-204ENST00000535399 PRKCEQ02156 737 aa25.57■■□□□ 1.68
SFSWAP-204ENST00000535399 GPNMBQ14956 572 aa25.57■■□□□ 1.68
SFSWAP-204ENST00000535399 ZNF618Q5T7W0 954 aa25.57■■□□□ 1.68
SFSWAP-204ENST00000535399 FAM167AQ96KS9 214 aa25.57■■□□□ 1.68
SFSWAP-204ENST00000535399 PCDHA12Q9UN75 941 aa25.57■■□□□ 1.68
SFSWAP-204ENST00000535399 STBD1O95210 358 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 OATP04181 439 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 RFC2P35250 354 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 THPOP40225 353 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 TXKP42681 527 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 EPHA7Q15375 998 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 ZNF484Q5JVG2 852 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 TMEM240Q5SV17 173 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 NCAPH2Q6IBW4 605 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 TAF2Q6P1X5 1199 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 RPAINQ86UA6 219 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 C4orf32Q8N8J7 132 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 TTC12Q9H892 705 aaPredicted RBP25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 PCDHB6Q9Y5E3 794 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 COL1A2P08123 1366 aa25.56■■□□□ 1.68
SFSWAP-204ENST00000535399 TRIP12Q14669 1992 aaPredicted RBP25.55■■□□□ 1.68
SFSWAP-204ENST00000535399 CAND2O75155 1236 aa25.55■■□□□ 1.68
SFSWAP-204ENST00000535399 OR52Z1P0C646 297 aa25.55■■□□□ 1.68
SFSWAP-204ENST00000535399 SYT1P21579 422 aa25.55■■□□□ 1.68
SFSWAP-204ENST00000535399 TRMT1LQ7Z2T5 733 aaKnown RBP25.55■■□□□ 1.68
SFSWAP-204ENST00000535399 BANK1Q8NDB2 785 aa25.55■■□□□ 1.68
SFSWAP-204ENST00000535399 PCDHA2Q9Y5H9 948 aa25.55■■□□□ 1.68
SFSWAP-204ENST00000535399 VPS37CA5D8V6 355 aaPredicted RBP25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 P4HBP07237 508 aaKnown RBP25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 PSMC5P62195 406 aa25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 MBTPS1Q14703 1052 aa25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 RILPL1Q5EBL4 403 aa25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 MTHFD1LQ6UB35 978 aa25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 ZNF365Q70YC5 407 aa25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 RPUSD2Q8IZ73 545 aaKnown RBP25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 NRBP2Q9NSY0 501 aa25.54■■□□□ 1.68
SFSWAP-204ENST00000535399 KLRC1P26715 233 aa25.53■■□□□ 1.68
SFSWAP-204ENST00000535399 QARSP47897 775 aaKnown RBP25.53■■□□□ 1.68
SFSWAP-204ENST00000535399 PSRC1Q6PGN9 363 aaPredicted RBP25.53■■□□□ 1.68
SFSWAP-204ENST00000535399 DEFB128Q7Z7B8 93 aa25.53■■□□□ 1.68
SFSWAP-204ENST00000535399 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.53■■□□□ 1.68
SFSWAP-204ENST00000535399 RGL1Q9NZL6 768 aa25.53■■□□□ 1.68
SFSWAP-204ENST00000535399 WRAP73Q9P2S5 460 aaPredicted RBP25.53■■□□□ 1.68
SFSWAP-204ENST00000535399 RSPH10B2B2RC85 870 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 NBNO60934 754 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 PARNO95453 639 aaKnown RBP25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 C22orf31O95567 290 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 PFKMP08237 780 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 RSPH10BP0C881 870 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 XKR3Q5GH77 459 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 FAM26DQ5JW98 314 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 DNAJB3Q8WWF6 145 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 CEP131Q9UPN4 1083 aa25.52■■□□□ 1.68
SFSWAP-204ENST00000535399 LAMA3Q16787 3333 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 RBAK-RBAKDNI3L0D1 243 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 CXCL10P02778 98 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 CTSHP09668 335 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 PTGDRQ13258 359 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 TARBP2Q15633 366 aaKnown RBP25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 BRAPQ7Z569 592 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 DYDC2Q96IM9 177 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 EIF2AK1Q9BQI3 630 aaKnown RBP25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 NIFKQ9BYG3 293 aaKnown RBP25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 FAM49AQ9H0Q0 323 aaPredicted RBP25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 MTMR6Q9Y217 621 aa25.51■■□□□ 1.67
SFSWAP-204ENST00000535399 SMIM35A0A1B0GVV1 85 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 TMEM150BA6NC51 233 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 POTEMA6NI47 508 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 FGBP02675 491 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 MGAT3Q09327 533 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 LRIT3Q3SXY7 679 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 RASIP1Q5U651 963 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 RSPH3Q86UC2 560 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 FERMT3Q86UX7 667 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 HERVK_113Q902F9 699 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 RNPC3Q96LT9 517 aaKnown RBP25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 CEP89Q96ST8 783 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 HSD17B14Q9BPX1 270 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 LXNQ9BS40 222 aa25.5■■□□□ 1.67
SFSWAP-204ENST00000535399 DDX11L8A8MPP1 907 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 DKC1O60832 514 aaKnown RBP eCLIP25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 SLITRK3O94933 977 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 CHRNA1P02708 482 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 RPLP2P05387 115 aaKnown RBP25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 TECP42680 631 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 CYP4A11Q02928 519 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 RESTQ13127 1097 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 CTTNQ14247 550 aaKnown RBP25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 ANO5Q75V66 913 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 C4orf19Q8IY42 314 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms