RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 CFHP08603 1231 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
VAMP1-204ENST00000535180 PDHBP11177 359 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
VAMP1-204ENST00000535180 ZNF528Q3MIS6 628 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 RARS2Q5T160 578 aaKnown RBP12.5□□□□□ -0.41
VAMP1-204ENST00000535180 MAML2Q8IZL2 1156 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-204ENST00000535180 GPR20Q99678 358 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 TMEM47Q9BQJ4 181 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 TBC1D17Q9HA65 648 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 TYW1Q9NV66 732 aaKnown RBP12.5□□□□□ -0.41
VAMP1-204ENST00000535180 IGSF9Q9P2J2 1179 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 SIT1Q9Y3P8 196 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 CDY2AQ9Y6F7 541 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 SPEGQ15772 3267 aa12.5□□□□□ -0.41
VAMP1-204ENST00000535180 FLNBO75369 2602 aaKnown RBP12.49□□□□□ -0.41
VAMP1-204ENST00000535180 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 SOBPA7XYQ1 873 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 NOP56O00567 594 aaKnown RBP12.49□□□□□ -0.41
VAMP1-204ENST00000535180 NARSO43776 548 aaKnown RBP12.49□□□□□ -0.41
VAMP1-204ENST00000535180 MYCLP12524 364 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-204ENST00000535180 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 PHLDB3Q6NSJ2 640 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 C12orf76Q8N812 135 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-204ENST00000535180 BCAS3Q9H6U6 928 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 ZNF215Q9UL58 517 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-204ENST00000535180 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 PCDHB7Q9Y5E2 793 aa12.49□□□□□ -0.41
VAMP1-204ENST00000535180 C2orf71A6NGG8 1288 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 POTEMA6NI47 508 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 M0R2C6 588 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 SLC30A4O14863 429 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
VAMP1-204ENST00000535180 ANP32CO43423 234 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
VAMP1-204ENST00000535180 CLASP2O75122 1294 aaKnown RBP12.48□□□□□ -0.41
VAMP1-204ENST00000535180 LAG3P18627 525 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 SARSP49591 514 aaKnown RBP12.48□□□□□ -0.41
VAMP1-204ENST00000535180 ZKSCAN2Q63HK3 967 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 KANK3Q6NY19 840 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 TMC7Q7Z402 723 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 VSIG10LQ86VR7 867 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 TRIM50Q86XT4 487 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 MRPL43Q8N983 215 aaKnown RBP12.48□□□□□ -0.41
VAMP1-204ENST00000535180 DNAJB3Q8WWF6 145 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 GPKOWQ92917 476 aaPredicted RBP eCLIP12.48□□□□□ -0.41
VAMP1-204ENST00000535180 PDCD2LQ9BRP1 358 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 NAPBQ9H115 298 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 CWH43Q9H720 699 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 DZANK1Q9NVP4 752 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 HCSTQ9UBK5 93 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 PADI3Q9ULW8 664 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 PCDHGA2Q9Y5H1 932 aa12.48□□□□□ -0.41
VAMP1-204ENST00000535180 PROS1P07225 676 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 MRPS6P82932 125 aaKnown RBP12.47□□□□□ -0.41
VAMP1-204ENST00000535180 SHC2P98077 582 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 KRT17Q04695 432 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 SMC1AQ14683 1233 aaKnown RBP12.47□□□□□ -0.41
VAMP1-204ENST00000535180 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 NETO1Q8TDF5 533 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 ATRIPQ8WXE1 791 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 EPC1Q9H2F5 836 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 FBXO4Q9UKT5 387 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 CA14Q9ULX7 337 aa12.47□□□□□ -0.41
VAMP1-204ENST00000535180 MBLAC1A4D2B0 266 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-204ENST00000535180 CFBP00751 764 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 RPLP2P05387 115 aaKnown RBP12.46□□□□□ -0.41
VAMP1-204ENST00000535180 ZFYP08048 801 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-204ENST00000535180 GLULP15104 373 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 PMLP29590 882 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 CTDSPL2Q05D32 466 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 PAK2Q13177 524 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 PGM5Q15124 567 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 CDC37Q16543 378 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-204ENST00000535180 IER5Q5VY09 327 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 METTL7BQ6UX53 244 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 FAM43BQ6ZT52 329 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-204ENST00000535180 CCDC149Q6ZUS6 474 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 ITPRIPQ8IWB1 547 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 TMX1Q9H3N1 280 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 PARD6AQ9NPB6 346 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.41
VAMP1-204ENST00000535180 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
VAMP1-204ENST00000535180 MRPL11Q9Y3B7 192 aaKnown RBP12.46□□□□□ -0.41
VAMP1-204ENST00000535180 EVPLQ92817 2033 aa12.45□□□□□ -0.42
VAMP1-204ENST00000535180 IGSF9BQ9UPX0 1349 aa12.45□□□□□ -0.42
VAMP1-204ENST00000535180 ORC4O43929 436 aa12.45□□□□□ -0.42
VAMP1-204ENST00000535180 IBSPP21815 317 aaPredicted RBP12.45□□□□□ -0.42
VAMP1-204ENST00000535180 PDE4AP27815 886 aa12.45□□□□□ -0.42
VAMP1-204ENST00000535180 PPM1AP35813 382 aa12.45□□□□□ -0.42
VAMP1-204ENST00000535180 HSD17B4P51659 736 aa12.45□□□□□ -0.42
VAMP1-204ENST00000535180 NONOQ15233 471 aaKnown RBP eCLIP12.45□□□□□ -0.42
VAMP1-204ENST00000535180 GPATCH4Q5T3I0 446 aaKnown RBP12.45□□□□□ -0.42
VAMP1-204ENST00000535180 UTP14CQ5TAP6 766 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms