RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-204	ENST00000535147	MNAT1	P51948	309 aa		11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	GABPA	Q06546	454 aa		11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	KCNA1	Q09470	495 aa		11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	EXOC3L4	Q17RC7	722 aa		11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	SFR1	Q86XK3	245 aa		11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	CNBD1	Q8NA66	436 aa		11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	CELF4	Q9BZC1	486 aa	Known RBP	11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	DHX36	Q9H2U1	1008 aa	Known RBP	11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	PLCB1	Q9NQ66	1216 aa		11.22	□□□□□ -0.61
DDB1-204	ENST00000535147	GOLGA6L10	A6NI86	522 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	DCDC2C	A8MYV0	355 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	RSPH10B2	B2RC85	870 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147		H0YGN5	161 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	KRIT1	O00522	736 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	ZBTB5	O15062	677 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	AKAP3	O75969	853 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	RSPH10B	P0C881	870 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	MYZAP	P0CAP1	466 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	SLC12A3	P55017	1021 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	ZNF844	Q08AG5	666 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	EMC10	Q5UCC4	262 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	TPCN2	Q8NHX9	752 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	CCNL1	Q9UK58	526 aa	Predicted RBP	11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	FBXL5	Q9UKA1	691 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	NFS1	Q9Y697	457 aa		11.21	□□□□□ -0.61
DDB1-204	ENST00000535147	IGKV6D-41	A0A0C4DH26	115 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	PGRMC1	O00264	195 aa	Known RBP	11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	CLIC2	O15247	247 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	TTI1	O43156	1089 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	AFP	P02771	609 aa	Known RBP	11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	IL1R1	P14778	569 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	GCFC2	P16383	781 aa	Known RBP	11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	GTF2I	P78347	998 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	SF3B2	Q13435	895 aa	Known RBP	11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	EDRF1	Q3B7T1	1238 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	MCTP2	Q6DN12	878 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	BARGIN	Q6ZT62	677 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	PEX26	Q7Z412	305 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	CATSPER3	Q86XQ3	398 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	RPGR	Q92834	1020 aa	Known RBP	11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	P2RX7	Q99572	595 aa	Known RBP	11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	REEP2	Q9BRK0	252 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	TRIM31	Q9BZY9	425 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	DPH5	Q9H2P9	285 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	POLL	Q9UGP5	575 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	GGA1	Q9UJY5	639 aa		11.21	□□□□□ -0.62
DDB1-204	ENST00000535147	GAK	O14976	1311 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	ZBTB48	P10074	688 aa	Predicted RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	XRCC5	P13010	732 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	SNAP25	P60880	206 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	CYP4A11	Q02928	519 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	GIT2	Q14161	759 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	PRR16	Q569H4	304 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	RC3H1	Q5TC82	1133 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	ADAT2	Q7Z6V5	191 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	DAAM2	Q86T65	1068 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	CNPY4	Q8N129	248 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	PRPF38A	Q8NAV1	312 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	ACTRT1	Q8TDG2	376 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	KCNMB3	Q9NPA1	279 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	NR2E1	Q9Y466	385 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	GOLGB1	Q14789	3259 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	FRMD3	A2A2Y4	597 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	SFI1	A8K8P3	1242 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	C6orf229	H3BNL8	230 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	FAM107A	O95990	144 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	TAL1	P17542	331 aa	Predicted RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	KNOP1	Q1ED39	458 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	QRICH1	Q2TAL8	776 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	ODF2	Q5BJF6	829 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	PPP1R18	Q6NYC8	613 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	U2AF1L4	Q8WU68	220 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	FAM163A	Q96GL9	167 aa	Predicted RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	PBK	Q96KB5	322 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	1e-7	■□□□□ 10.5
DDB1-204	ENST00000535147	MXD3	Q9BW11	206 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	OSGEP	Q9NPF4	335 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	CNOT8	Q9UFF9	292 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	SERPINB13	Q9UIV8	391 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	PCDHA1	Q9Y5I3	950 aa		11.2	□□□□□ -0.62
DDB1-204	ENST00000535147	FAM196B	A6NMK8	535 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	BTNL10	A8MVZ5	291 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	DDX3X	O00571	662 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	RIMBP2	O15034	1052 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	RGL2	O15211	777 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	GFPT2	O94808	682 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	H2AFZ	P0C0S5	128 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	HOXA7	P31268	230 aa	Predicted RBP	11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	COPB2	P35606	906 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	CUL1	Q13616	776 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	QPCT	Q16769	361 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	SLC30A10	Q6XR72	485 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	H2AFV	Q71UI9	128 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	CYFIP2	Q96F07	1278 aa		11.19	□□□□□ -0.62
DDB1-204	ENST00000535147	ANO3	Q9BYT9	981 aa		11.19	□□□□□ -0.62

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