RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 ZNF552Q9H707 407 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 EBF1Q9UH73 591 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MAST3O60307 1309 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CDHR2Q9BYE9 1310 aa6.93□□□□□ -1.3
TNFRSF1A-206ENST00000535038 COL14A1Q05707 1796 aaKnown RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 NUP98P52948 1817 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 COL16A1Q07092 1604 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TEX51A0A1B0GUA7 166 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RNF113AO15541 343 aaKnown RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SORBS3O60504 671 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PSPNO60542 156 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 JAK2O60674 1132 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DNAJA2O60884 412 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PCCAP05165 728 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 HMGB1P09429 215 aaKnown RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 IL2RBP14784 551 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SCRN1Q12765 414 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TCIRG1Q13488 830 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MPP2Q14168 576 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 LRRC24Q50LG9 513 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 NAA16Q6N069 864 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 REC114Q7Z4M0 266 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GOLM1Q8NBJ4 401 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 NSUN7Q8NE18 718 aaKnown RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 LINC01599Q8WXQ3 324 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PGBD1Q96JS3 809 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ZNF512BQ96KM6 892 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TCEANC2Q96MN5 208 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SPTLC3Q9NUV7 552 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PAG1Q9NWQ8 432 aa6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MYO5AQ9Y4I1 1855 aaKnown RBP6.92□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SLIT2O94813 1529 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TIAM2Q8IVF5 1701 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 LAMB2P55268 1798 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DTNBO60941 627 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 HSPD1P10809 573 aaKnown RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MSNP26038 577 aaKnown RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 KCNJ4P48050 445 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GALK1P51570 392 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CTSWP56202 376 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TIMM10P62072 90 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 FAM173BQ6P4H8 233 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GIMAP6Q6P9H5 292 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 Q6ZUG5 572 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DDX46Q7L014 1031 aaKnown RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 BRF1Q92994 677 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 VWCEQ96DN2 955 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ZNF274Q96GC6 653 aaPredicted RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 NAP1L5Q96NT1 182 aaPredicted RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PUS3Q9BZE2 481 aaKnown RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SCAND2PQ9GZW5 306 aaPredicted RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CLSTN2Q9H4D0 955 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PRDM11Q9NQV5 511 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DDX19AQ9NUU7 478 aaKnown RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 USP25Q9UHP3 1055 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RCOR1Q9UKL0 485 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 CNOT6Q9ULM6 557 aaKnown RBP6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MRVI1Q9Y6F6 885 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ECM29Q5VYK3 1845 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 WDR19Q8NEZ3 1342 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 BCL9O00512 1426 aa6.91□□□□□ -1.3
TNFRSF1A-206ENST00000535038 A0A0G2JLW4 131 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 A0A1B0GUL7 405 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 VPS37CA5D8V6 355 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 E7EWF7 191 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 M0R2C6 588 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GOLIM4O00461 696 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ADCY5O95622 1261 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RPL10P27635 214 aaKnown RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RNF4P78317 190 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ATL3Q6DD88 541 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DNAJC14Q6Y2X3 702 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RNF111Q6ZNA4 994 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 VGLL2Q8N8G2 317 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ENGASEQ8NFI3 743 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TDRD7Q8NHU6 1098 aaKnown RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 SYTL5Q8TDW5 730 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 PIBF1Q8WXW3 757 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 DNAJC2Q99543 621 aaKnown RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 G6PC3Q9BUM1 346 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 TEX13AQ9BXU3 409 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 HDAC8Q9BY41 377 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ZSCAN16Q9H4T2 348 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 VTI1BQ9UEU0 232 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 RIPOR2Q9Y4F9 1068 aa6.9□□□□□ -1.3
TNFRSF1A-206ENST00000535038 OR14I1A6ND48 311 aa6.89□□□□□ -1.31
TNFRSF1A-206ENST00000535038 RGS13O14921 159 aa6.89□□□□□ -1.31
TNFRSF1A-206ENST00000535038 ZFYP08048 801 aaPredicted RBP6.89□□□□□ -1.31
TNFRSF1A-206ENST00000535038 IFIT1P09914 478 aaKnown RBP6.89□□□□□ -1.31
TNFRSF1A-206ENST00000535038 CCDC192P0DO97 292 aa6.89□□□□□ -1.31
TNFRSF1A-206ENST00000535038 FDPSP14324 419 aaKnown RBP6.89□□□□□ -1.31
TNFRSF1A-206ENST00000535038 PDIA3P30101 505 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms