RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SAMM50Q9Y512 469 aa13.73□□□□□ -0.21
SCARB1-204ENST00000535005 SORBS3O60504 671 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.211e-7■■■■□ 19.3
SCARB1-204ENST00000535005 RARBP10826 455 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 PTGS1P23219 599 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 CDC25BP30305 580 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
SCARB1-204ENST00000535005 NDUFA8P51970 172 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 PSMC5P62195 406 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 SP4Q02446 784 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 TMEM119Q4V9L6 283 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 CCDC73Q6ZRK6 1079 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 FMR1NBQ8N0W7 255 aaPredicted RBP13.72□□□□□ -0.21
SCARB1-204ENST00000535005 PCYT2Q99447 389 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 RGL1Q9NZL6 768 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 MAFBQ9Y5Q3 323 aaPredicted RBP13.72□□□□□ -0.21
SCARB1-204ENST00000535005 EMSYQ7Z589 1322 aa13.72□□□□□ -0.21
SCARB1-204ENST00000535005 A0A087X0B3 334 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 CTAGE5O15320 804 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 LIG1P18858 919 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
SCARB1-204ENST00000535005 SYKP43405 635 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 CPT1AP50416 773 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 SNW1Q13573 536 aaKnown RBP13.71□□□□□ -0.21
SCARB1-204ENST00000535005 KARSQ15046 597 aaKnown RBP13.71□□□□□ -0.21
SCARB1-204ENST00000535005 ECM1Q16610 540 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 SWSAP1Q6NVH7 229 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 PLPPR4Q7Z2D5 763 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 CCDC60Q8IWA6 550 aaPredicted RBP13.71□□□□□ -0.21
SCARB1-204ENST00000535005 C4orf19Q8IY42 314 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 LENG1Q96BZ8 264 aaPredicted RBP13.71□□□□□ -0.21
SCARB1-204ENST00000535005 ZSWIM4Q9H7M6 989 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.21
SCARB1-204ENST00000535005 PYCARDQ9ULZ3 195 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.21
SCARB1-204ENST00000535005 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 ADAMTS4O75173 837 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 MMP3P08254 477 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 CTTNQ14247 550 aaKnown RBP13.71□□□□□ -0.22
SCARB1-204ENST00000535005 E2F4Q16254 413 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.22
SCARB1-204ENST00000535005 RRAGBQ5VZM2 374 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 LHX8Q68G74 356 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 RBM43Q6ZSC3 357 aaKnown RBP13.71□□□□□ -0.22
SCARB1-204ENST00000535005 IQUBQ8NA54 791 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 ATP6V0A1Q93050 837 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 ARMC5Q96C12 935 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 LXNQ9BS40 222 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.71□□□□□ -0.222e-9■■■□□ 15.3
SCARB1-204ENST00000535005 CUEDC2Q9H467 287 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 SPC25Q9HBM1 224 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 ZNF302Q9NR11 478 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 GABBR1Q9UBS5 961 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 STK17AQ9UEE5 414 aa13.71□□□□□ -0.22
SCARB1-204ENST00000535005 SYNRGQ9UMZ2 1314 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 POTEB3A0JP26 581 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 POLR2DO15514 142 aaKnown RBP13.7□□□□□ -0.22
SCARB1-204ENST00000535005 KPNA6O60684 536 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 PLCG1P19174 1290 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 CST5P28325 142 aaPredicted RBP13.7□□□□□ -0.22
SCARB1-204ENST00000535005 SLC26A2P50443 739 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 STAT5BP51692 787 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 CYP4A11Q02928 519 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
SCARB1-204ENST00000535005 UGCGQ16739 394 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 DGKDQ16760 1214 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 POTEBQ6S5H4 581 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 TPH2Q8IWU9 490 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 KLHDC9Q8NEP7 349 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 NACC1Q96RE7 527 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 SMARCAD1Q9H4L7 1026 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 AZI2Q9H6S1 392 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 XPNPEP3Q9NQH7 507 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 PAK6Q9NQU5 681 aaPredicted RBP13.7□□□□□ -0.22
SCARB1-204ENST00000535005 WRAP73Q9P2S5 460 aaPredicted RBP13.7□□□□□ -0.22
SCARB1-204ENST00000535005 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
SCARB1-204ENST00000535005 BACH1O14867 736 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ZNF862O60290 1169 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 NR1I2O75469 434 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ZNF202O95125 648 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 STBD1O95210 358 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 RASSF8Q8NHQ8 419 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 BLOC1S4Q9NUP1 217 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 DNM3Q9UQ16 869 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 LGALS2P05162 132 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 SLFN14P0C7P3 912 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ATP4AP20648 1035 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 STAT6P42226 847 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 NCBP1Q09161 790 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms