RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PLEKHA4	Q9H4M7	779 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RHPN2	Q8IUC4	686 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	C10orf67	Q8IYJ2	551 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	MICALL1	Q8N3F8	863 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ANKRD42	Q8N9B4	389 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	WDR19	Q8NEZ3	1342 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PSMC5	P62195	406 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	MTMR2	Q13614	643 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ERICH1	Q86X53	443 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ENAH	Q8N8S7	591 aa	Predicted RBP	16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	IKBKB	O14920	756 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	COBL	O75128	1261 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	KCNJ6	P48051	423 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	HUNK	P57058	714 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ANGEL2	Q5VTE6	544 aa	Known RBP	16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	BZW1	Q7L1Q6	419 aa	Known RBP	16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	U2AF2	P26368	475 aa	Known RBP eCLIP	16.99	■□□□□ 0.31	1e-6	■□□□□ 8.4
NCAPD3-213	ENST00000534532	RBBP5	Q15291	538 aa	Known RBP	16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	TKFC	Q3LXA3	575 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	MAGOHB	Q96A72	148 aa	Known RBP	16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	TEX13B	Q9BXU2	312 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GGA3	Q9NZ52	723 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NEDD4	P46934	1319 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ZNF521	Q96K83	1311 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SLC4A1	P02730	911 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GUCY2F	P51841	1108 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NOP9	Q86U38	636 aa	Known RBP	16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RPUSD2	Q8IZ73	545 aa	Known RBP	16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	HDAC11	Q96DB2	347 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PLA2G12B	Q9BX93	195 aa		16.99	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PPARG	P37231	505 aa	Predicted RBP	16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	LDHD	Q86WU2	507 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	MAN1B1	Q9UKM7	699 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	STK36	Q9NRP7	1315 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	TXN	P10599	105 aa	Known RBP	16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ATP11A	P98196	1134 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NXN	Q6DKJ4	435 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ADGRF4	Q8IZF3	695 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ZNF280C	Q8ND82	737 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	OR6J1	Q8NGC5	347 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	AIFM3	Q96NN9	605 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	MXD3	Q9BW11	206 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SFI1	A8K8P3	1242 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SREBF2	Q12772	1141 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	XXYLT1	Q8NBI6	393 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CPVL	Q9H3G5	476 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ORC4	O43929	436 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	AKR1B1	P15121	316 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	THOC5	Q13769	683 aa	Known RBP	16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SCARF1	Q14162	830 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GRAMD1C	Q8IYS0	662 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	LINC00116	Q8NCU8	138 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ATP6V1E2	Q96A05	226 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	OSBPL5	Q9H0X9	879 aa	Predicted RBP	16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	IRAK4	Q9NWZ3	460 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	DAGLA	Q9Y4D2	1042 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	DPEP1	P16444	411 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ZNF18	P17022	549 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SATB1	Q01826	763 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	C10orf76	Q5T2E6	689 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PAGE5	Q96GU1	130 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	DYDC2	Q96IM9	177 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NUF2	Q9BZD4	464 aa		16.98	■□□□□ 0.31
NCAPD3-213	ENST00000534532	IPO5	O00410	1097 aa	Known RBP	16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CAMTA2	O94983	1202 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	INHBA	P08476	426 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NNMT	P40261	264 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GPC3	P51654	580 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	DARS2	Q6PI48	645 aa	Known RBP	16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ZNF70	Q9UC06	446 aa	Predicted RBP	16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RFX7	Q2KHR2	1363 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	IQCB1	Q15051	598 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NAA35	Q5VZE5	725 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RAPH1	Q70E73	1250 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	UNC13D	Q70J99	1090 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	FAM133A	Q8N9E0	248 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GDA	Q9Y2T3	454 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SCIN	Q9Y6U3	715 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CETP	P11597	493 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GMPS	P49915	693 aa	Predicted RBP	16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CDC42EP1	Q00587	391 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ZNF699	Q32M78	642 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	HHIPL2	Q6UWX4	724 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ZNF34	Q8IZ26	560 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ARHGEF2	Q92974	986 aa	Known RBP	16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	KATNAL1	Q9BW62	490 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	VCX	Q9H320	206 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NMT2	O60551	498 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CP	P00450	1065 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SIRT2	Q8IXJ6	389 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	TTC39C	Q8N584	583 aa		16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	MRPL4	Q9BYD3	311 aa	Known RBP	16.97	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SPDYE2B	A6NHP3	402 aa		16.96	■□□□□ 0.31
NCAPD3-213	ENST00000534532	KIF28P	B7ZC32	967 aa		16.96	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PPFIA4	O75335	1185 aa		16.96	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SPDYE6	P0CI01	402 aa		16.96	■□□□□ 0.31
NCAPD3-213	ENST00000534532	FOXO4	P98177	505 aa		16.96	■□□□□ 0.31
NCAPD3-213	ENST00000534532	FAM8A1	Q9UBU6	413 aa		16.96	■□□□□ 0.31
NCAPD3-213	ENST00000534532	LRRD1	A4D1F6	860 aa		16.96	■□□□□ 0.31

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms