RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 CDY2AQ9Y6F7 541 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 M0QZ92 97 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 CPLX1O14810 134 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 BACH1O14867 736 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
CAPN1-228ENST00000534373 DEXIO95424 95 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 GHRP10912 638 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 NLRP5P59047 1200 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 KRT76Q01546 638 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 ZNF484Q5JVG2 852 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 GALNT17Q6IS24 598 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 MTHFD1LQ6UB35 978 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 TSHZ1Q6ZSZ6 1077 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 MICALL1Q8N3F8 863 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 FTHL17Q9BXU8 183 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
CAPN1-228ENST00000534373 ZNF302Q9NR11 478 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 PDRG1Q9NUG6 133 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 VPS54Q9P1Q0 977 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 TCEAL9Q9UHQ7 104 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 PCDHA10Q9Y5I2 948 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
CAPN1-228ENST00000534373 COL1A2P08123 1366 aa15.2■□□□□ 0.02
CAPN1-228ENST00000534373 PRRC2BQ5JSZ5 2229 aaKnown RBP15.2■□□□□ 0.02
CAPN1-228ENST00000534373 KDM3AQ9Y4C1 1321 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 DDX39AO00148 427 aaKnown RBP15.19■□□□□ 0.02
CAPN1-228ENST00000534373 ENPP3O14638 875 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 ADAMTS3O15072 1205 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 ANAPC15P60006 121 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 PRR16Q569H4 304 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 SWSAP1Q6NVH7 229 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 PDXDC2PQ6P474 469 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 BBXQ8WY36 941 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-228ENST00000534373 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 CELF4Q9BZC1 486 aaKnown RBP15.19■□□□□ 0.02
CAPN1-228ENST00000534373 PCDHA4Q9UN74 947 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 MAFBQ9Y5Q3 323 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-228ENST00000534373 TRPV2Q9Y5S1 764 aa15.19■□□□□ 0.02
CAPN1-228ENST00000534373 UPP2O95045 317 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 PSAPP07602 524 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 KLRC1P26715 233 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 SKIV2LQ15477 1246 aaKnown RBP15.18■□□□□ 0.02
CAPN1-228ENST00000534373 SPRED2Q7Z698 418 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 CCDC60Q8IWA6 550 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-228ENST00000534373 IL27Q8NEV9 243 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 LENG9Q96B70 501 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 RIT2Q99578 217 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 UPF3BQ9BZI7 483 aaKnown RBP15.18■□□□□ 0.02
CAPN1-228ENST00000534373 FAM49AQ9H0Q0 323 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-228ENST00000534373 CEP131Q9UPN4 1083 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 COL4A6Q14031 1691 aa15.18■□□□□ 0.02
CAPN1-228ENST00000534373 IGSF9BQ9UPX0 1349 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 CYP3A7-CYP3A51PA0A087WV96 503 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 CDKL5O76039 1030 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 ATP4AP20648 1035 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 CYP3A7P24462 503 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 EPC2Q52LR7 807 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 ODR4Q5SWX8 454 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 KRT40Q6A162 431 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 ZNF710Q8N1W2 664 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 DAGLBQ8NCG7 672 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 RASGRP4Q8TDF6 673 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 GDPD5Q8WTR4 605 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 TRAPPC12Q8WVT3 735 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 HLA-CQ95604 372 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 C17orf80Q9BSJ5 609 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 AGO3Q9H9G7 860 aaKnown RBP15.17■□□□□ 0.02
CAPN1-228ENST00000534373 MTUS1Q9ULD2 1270 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 RWDD3Q9Y3V2 267 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 XIRP2A4UGR9 3374 aa15.17■□□□□ 0.02
CAPN1-228ENST00000534373 WDR64B1ANS9 1081 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 H3BNC9 293 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 M0R2N6 131 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 EDIL3O43854 480 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 PPFIA3O75145 1194 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 RB1P06400 928 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 BMP1P13497 986 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 SFNP31947 248 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 ANKRD1Q15327 319 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 PTPROQ16827 1216 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 Q4G0T1 1027 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 TMEM192Q8IY95 271 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 CKAP2LQ8IYA6 745 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 KIAA0319LQ8IZA0 1049 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 BLIDQ8IZY5 108 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 FIBCD1Q8N539 461 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 TBCKQ8TEA7 893 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 FAM167AQ96KS9 214 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-228ENST00000534373 PADI3Q9ULW8 664 aa15.16■□□□□ 0.02
CAPN1-228ENST00000534373 MUC3AQ02505 3323 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 ZBTB42B2RXF5 422 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 TNFRSF10AO00220 468 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 MSH4O15457 936 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 MAGEB2O15479 319 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 XBP1P17861 261 aa15.15■□□□□ 0.02
CAPN1-228ENST00000534373 CD52P31358 61 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms