RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 CMTR1Q8N1G2 835 aaKnown RBP17.13■□□□□ 0.33
CTSB-230ENST00000534149 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
CTSB-230ENST00000534149 TRAPPC12Q8WVT3 735 aa17.13■□□□□ 0.33
CTSB-230ENST00000534149 MAP3K14Q99558 947 aa17.13■□□□□ 0.33
CTSB-230ENST00000534149 TRPC6Q9Y210 931 aa17.13■□□□□ 0.33
CTSB-230ENST00000534149 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
CTSB-230ENST00000534149 SQORQ9Y6N5 450 aa17.13■□□□□ 0.33
CTSB-230ENST00000534149 USP34Q70CQ2 3546 aa17.13■□□□□ 0.33
CTSB-230ENST00000534149 KMT2EQ8IZD2 1858 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 RPLP2P05387 115 aaKnown RBP17.12■□□□□ 0.33
CTSB-230ENST00000534149 PDE4AP27815 886 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 SMARCA1P28370 1054 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 ZXDAP98168 799 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 RUFY2Q8WXA3 655 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
CTSB-230ENST00000534149 JADE2Q9NQC1 790 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 LRFN2Q9ULH4 789 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 IGSF9BQ9UPX0 1349 aa17.12■□□□□ 0.33
CTSB-230ENST00000534149 FNDC1Q4ZHG4 1894 aaPredicted RBP17.12■□□□□ 0.33
CTSB-230ENST00000534149 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 RXRAP19793 462 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 CHMLP26374 656 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 PTPN5P54829 565 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 RBM10P98175 930 aaKnown RBP17.11■□□□□ 0.33
CTSB-230ENST00000534149 CBX2Q14781 532 aaPredicted RBP17.11■□□□□ 0.33
CTSB-230ENST00000534149 PLCB4Q15147 1175 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 SUGP1Q8IWZ8 645 aaKnown RBP17.11■□□□□ 0.33
CTSB-230ENST00000534149 LZTS2Q9BRK4 669 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 CELF4Q9BZC1 486 aaKnown RBP17.11■□□□□ 0.33
CTSB-230ENST00000534149 AZI2Q9H6S1 392 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 PCDHA2Q9Y5H9 948 aa17.11■□□□□ 0.33
CTSB-230ENST00000534149 PER2O15055 1255 aa17.1■□□□□ 0.33
CTSB-230ENST00000534149 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
CTSB-230ENST00000534149 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
CTSB-230ENST00000534149 MICAL1Q8TDZ2 1067 aa17.1■□□□□ 0.33
CTSB-230ENST00000534149 RPGRIP1Q96KN7 1286 aa17.1■□□□□ 0.33
CTSB-230ENST00000534149 TLE6Q9H808 572 aa17.1■□□□□ 0.33
CTSB-230ENST00000534149 CACNA1HO95180 2353 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 MAFGO15525 162 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 PRC1O43663 620 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 MGEA5O60502 916 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
CTSB-230ENST00000534149 GNAQP50148 359 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 ACTR2P61160 394 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 KRT76Q01546 638 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 TCF15Q12870 199 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
CTSB-230ENST00000534149 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
CTSB-230ENST00000534149 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 VN1R2Q8NFZ6 395 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 PHF7Q9BWX1 381 aaPredicted RBP17.09■□□□□ 0.33
CTSB-230ENST00000534149 KCNH7Q9NS40 1196 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 HCSTQ9UBK5 93 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 PCDHB7Q9Y5E2 793 aa17.09■□□□□ 0.33
CTSB-230ENST00000534149 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 CCDC69A6NI79 296 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
CTSB-230ENST00000534149 SGSM2O43147 1006 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 STAT5BP51692 787 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 MTHFD1LQ6UB35 978 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 PLPPR4Q7Z2D5 763 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 HEATR3Q7Z4Q2 680 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 FBXL6Q8N531 539 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 CYP2W1Q8TAV3 490 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
CTSB-230ENST00000534149 MXRA8Q9BRK3 442 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 TLR9Q9NR96 1032 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
CTSB-230ENST00000534149 EVPLQ92817 2033 aa17.08■□□□□ 0.32
CTSB-230ENST00000534149 UBE3AQ05086 875 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 SIGLEC14Q08ET2 396 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 COL9A3Q14050 684 aaPredicted RBP17.07■□□□□ 0.32
CTSB-230ENST00000534149 PKN1Q16512 942 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 FAM102BQ5T8I3 360 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 NME8Q8N427 588 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 SUSD6Q92537 303 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 PGBD1Q96JS3 809 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 PRRX2Q99811 253 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 ERVK-5Q9HDB9 667 aa17.07■□□□□ 0.32
CTSB-230ENST00000534149 NFASCO94856 1347 aa17.06■□□□□ 0.32
CTSB-230ENST00000534149 RPS6KA5O75582 802 aa17.06■□□□□ 0.32
CTSB-230ENST00000534149 FGF18O76093 207 aa17.06■□□□□ 0.32
CTSB-230ENST00000534149 ARP10275 920 aa17.06■□□□□ 0.32
CTSB-230ENST00000534149 ATF7P17544 494 aaPredicted RBP17.06■□□□□ 0.32
CTSB-230ENST00000534149 VCPP55072 806 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms