RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 ATP2A1O14983 1001 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 ZBED4O75132 1171 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 BAG4O95429 457 aaKnown RBP7.01□□□□□ -1.29
CMTM1-220ENST00000534143 ICAM1P05362 532 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 CETPP11597 493 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 CALML3P27482 149 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 KRT2P35908 639 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 GTF2A2P52657 109 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 NAPAP54920 295 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 TRAF1Q13077 416 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 GRM1Q13255 1194 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
CMTM1-220ENST00000534143 MCTP1Q6DN14 999 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 RGMBQ6NW40 437 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 FAM173BQ6P4H8 233 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 LBX2Q6XYB7 198 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 BRAPQ7Z569 592 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 BLIDQ8IZY5 108 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 MICALL1Q8N3F8 863 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 CCDC12Q8WUD4 166 aaPredicted RBP7.01□□□□□ -1.29
CMTM1-220ENST00000534143 BRI3BPQ8WY22 251 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 ATG4CQ96DT6 458 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 TRIM11Q96F44 468 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 HHIPL1Q96JK4 782 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 CHAMP1Q96JM3 812 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 PNMA5Q96PV4 448 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 P2RX7Q99572 595 aaKnown RBP7.01□□□□□ -1.29
CMTM1-220ENST00000534143 ASCC2Q9H1I8 757 aaPredicted RBP7.01□□□□□ -1.29
CMTM1-220ENST00000534143 C6orf50Q9HD87 102 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 RIC8AQ9NPQ8 531 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 PRDM6Q9NQX0 595 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 HOXC10Q9NYD6 342 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 ABT1Q9ULW3 272 aaKnown RBP7.01□□□□□ -1.29
CMTM1-220ENST00000534143 SLC45A1Q9Y2W3 748 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 PCDHA1Q9Y5I3 950 aa7.01□□□□□ -1.29
CMTM1-220ENST00000534143 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.01□□□□□ -1.29
CMTM1-220ENST00000534143 CCL15-CCL14A0A0B4J2E2 113 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 FAM155AB1AL88 458 aaPredicted RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 BTBD19C9JJ37 291 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 M0R082 166 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 MEIS2O14770 477 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 TAL1P17542 331 aaPredicted RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 GNA11P29992 359 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 ZNF157P51786 506 aaPredicted RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 OAZ1P54368 228 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 GHRHRQ02643 423 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 DNM1Q05193 864 aaKnown RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 PABPC4Q13310 644 aaKnown RBP eCLIP7□□□□□ -1.29
CMTM1-220ENST00000534143 CCL15Q16663 113 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 DEFB115Q30KQ5 88 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 NOM1Q5C9Z4 860 aaKnown RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 EARS2Q5JPH6 523 aaKnown RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 C16orf46Q6P387 395 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 CCDC174Q6PII3 467 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 ANKRD23Q86SG2 305 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 NOSTRINQ8IVI9 506 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 ZNF417Q8TAU3 575 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 CLEC4DQ8WXI8 215 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 ZNF587Q96SQ5 575 aaPredicted RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 PTPN18Q99952 460 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 PLVAPQ9BX97 442 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 SAP130Q9H0E3 1048 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 RAVER2Q9HCJ3 691 aaKnown RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 PNMA2Q9UL42 364 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 ZNF214Q9UL59 606 aaPredicted RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 PCDHA6Q9UN73 950 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 MRPL11Q9Y3B7 192 aaKnown RBP7□□□□□ -1.29
CMTM1-220ENST00000534143 PCDHA8Q9Y5H6 950 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 ATP6V1DQ9Y5K8 247 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 CASP8AP2Q9UKL3 1982 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 ABCB11O95342 1321 aa7□□□□□ -1.29
CMTM1-220ENST00000534143 MYH7BA7E2Y1 1941 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 MANSC4A6NHS7 340 aaPredicted RBP6.99□□□□□ -1.29
CMTM1-220ENST00000534143 MSTNO14793 375 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 EDIL3O43854 480 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 CNMDO75829 334 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 ALBP02768 609 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 NFKB1P19838 968 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 TOB1P50616 345 aaPredicted RBP6.99□□□□□ -1.29
CMTM1-220ENST00000534143 ADCY7P51828 1080 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 MRPL12P52815 198 aaKnown RBP6.99□□□□□ -1.29
CMTM1-220ENST00000534143 HERVK_113P62684 666 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 IRX3P78415 501 aaPredicted RBP6.99□□□□□ -1.29
CMTM1-220ENST00000534143 TMEM132BQ14DG7 1078 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 USH1GQ495M9 461 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 ATL3Q6DD88 541 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 CYP4F22Q6NT55 531 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 C20orf204Q6ZNR8 217 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 TREML1Q86YW5 311 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 CPXCR1Q8N123 301 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 SAMD3Q8N6K7 520 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 MB21D1Q8N884 522 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 BICD2Q8TD16 824 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 RASGRP4Q8TDF6 673 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 TBC1D5Q92609 795 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 USP28Q96RU2 1077 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 GLT8D2Q9H1C3 349 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 PSTPIP2Q9H939 334 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms