RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 DSC3Q14574 896 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 CCDC85BQ15834 202 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 CWF19L2Q2TBE0 894 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 ALG1LQ6GMV1 187 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 TMPRSS7Q7RTY8 843 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 ZFPM1Q8IX07 1006 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 ANKRD13CQ8N6S4 541 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 FBF1Q8TES7 1133 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 CDC5LQ99459 802 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 OSBPL7Q9BZF2 842 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 TRIT1Q9H3H1 467 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 EPHX3Q9H6B9 360 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 CWC25Q9NXE8 425 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 GJD2Q9UKL4 321 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 OGDHLQ9ULD0 1010 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 CHD9Q3L8U1 2897 aa3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 RBBP6Q7Z6E9 1792 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-208ENST00000534106 TREHO43280 583 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 CST3P01034 146 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 PGRP06401 933 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 USP17L7P0C7H9 530 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 COL6A1P12109 1028 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 CYP2B6P20813 491 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 CCND3P30281 292 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 IGHMBP2P38935 993 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ETV3P41162 512 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 MMP14P50281 582 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 EPHB4P54760 987 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 TCP10Q12799 353 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 MFSD14BQ5SR56 506 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 TREML2Q5T2D2 321 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 APOBEC3HQ6NTF7 200 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 GADL1Q6ZQY3 521 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ZSCAN29Q8IWY8 852 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 CCDC146Q8IYE0 955 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 OXR1Q8N573 874 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 RETREG2Q8NC44 543 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 CCDC191Q8NCU4 936 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 BADQ92934 168 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 SNX27Q96L92 541 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ASB2Q96Q27 587 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 LRFN3Q9BTN0 628 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 PCGF6Q9BYE7 350 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 SENP6Q9GZR1 1112 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ANKRD2Q9GZV1 360 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ADAMTS10Q9H324 1103 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ZCCHC4Q9H5U6 513 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ZCCHC17Q9NP64 241 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 CD320Q9NPF0 282 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 HYPKQ9NX55 129 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 FAM8A1Q9UBU6 413 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 DBF4Q9UBU7 674 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 DUSP13Q9UII6 198 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 MAP3K2Q9Y2U5 619 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 ZHX2Q9Y6X8 837 aa3.8□□□□□ -1.8
CHMP4A-208ENST00000534106 REV3LO60673 3130 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 CACNA1AO00555 2505 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 PI4KAP2A4QPH2 592 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 TRIM43BA6NCK2 446 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 FAM86C2PA6NEL3 165 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 WASH4PA8MWX3 477 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 GRXCR1A8MXD5 290 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 HPXP02790 462 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 ESR1P03372 595 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 MED14OSP0DP75 135 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 BMP7P18075 431 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 ITGB8P26012 769 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 TRHRP34981 398 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 CAP2P40123 477 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 TMPOP42166 694 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 CDK8P49336 464 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 CACNB2Q08289 660 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 CHAF1AQ13111 956 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 TNFAIP1Q13829 316 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 CCL14Q16627 93 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 EPHA10Q5JZY3 1008 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 DIEXFQ68CQ4 756 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 G2E3Q7L622 706 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 UBE3BQ7Z3V4 1068 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 ZNF605Q86T29 641 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 PI4KAP1Q8N8J0 262 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 C8orf58Q8NAV2 365 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 TDRD7Q8NHU6 1098 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 PIWIL2Q8TC59 973 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 TRIB2Q92519 343 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 RELTQ969Z4 430 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 TRIM43Q96BQ3 446 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 COA7Q96BR5 231 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 FAM84BQ96KN1 310 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 UHRF1Q96T88 793 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 PARK7Q99497 189 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 MPHOSPH8Q99549 860 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 DPH2Q9BQC3 489 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 LBHD1Q9BQE6 289 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 ZNF341Q9BYN7 854 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 SLC6A17Q9H1V8 727 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 C12orf49Q9H741 205 aa3.79□□□□□ -1.8
CHMP4A-208ENST00000534106 GPATCH2Q9NW75 528 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms