RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CD52P31358 61 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 CIITAP33076 1130 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 TFF2Q03403 129 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 NR5A1Q13285 461 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 GRB10Q13322 594 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 DRP2Q13474 957 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 INF2Q27J81 1249 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 MYOCDQ8IZQ8 938 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 TMEM40Q8WWA1 233 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 CDHR1Q96JP9 859 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 SLC9A7Q96T83 725 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 SDF4Q9BRK5 362 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 TMX1Q9H3N1 280 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 ERAP1Q9NZ08 941 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 ZNF215Q9UL58 517 aaPredicted RBP10.95□□□□□ -0.66
SSBP3-215ENST00000533946 PCDHA4Q9UN74 947 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
SSBP3-215ENST00000533946 TRIOO75962 3097 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 TMEM265A0A087WTH1 108 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 A0A087WWV3 80 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 EML1O00423 815 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 MAFGO15525 162 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 LINC00271P0C7V0 271 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-215ENST00000533946 KLRC1P26715 233 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 NEK4P51957 841 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 AKAP17AQ02040 695 aaKnown RBP10.94□□□□□ -0.66
SSBP3-215ENST00000533946 IKBKEQ14164 716 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 FBXO47Q5MNV8 452 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 MTHFD1LQ6UB35 978 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 NIPA1Q7RTP0 329 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 KIAA0319LQ8IZA0 1049 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 BLIDQ8IZY5 108 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 CCDC155Q8N6L0 562 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-215ENST00000533946 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
SSBP3-215ENST00000533946 GIMAP8Q8ND71 665 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-215ENST00000533946 SLC5A5Q92911 643 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 IL17RAQ96F46 866 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 WRAP73Q9P2S5 460 aaPredicted RBP10.94□□□□□ -0.66
SSBP3-215ENST00000533946 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 GABBR1Q9UBS5 961 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 MTCH2Q9Y6C9 303 aa10.94□□□□□ -0.66
SSBP3-215ENST00000533946 ABHD14A-ACY1A0A1B0GW23 586 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 ENPP3O14638 875 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 BACH1O14867 736 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 ZBTB39O15060 712 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 EPB41L2O43491 1005 aaKnown RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 CSDE1O75534 798 aaKnown RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 BAIAP3O94812 1187 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 DEXIO95424 95 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 C22orf31O95567 290 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 VTNP04004 478 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 KCNJ6P48051 423 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 CLCN3P51790 818 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 MRPS6P82932 125 aaKnown RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 GUCY1B3Q02153 619 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 PDXDC2PQ6P474 469 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 B3GNT9Q6UX72 402 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 PLPPR4Q7Z2D5 763 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 LRRC71Q8N4P6 559 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 NSUN7Q8NE18 718 aaKnown RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 ETNPPLQ8TBG4 499 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 PHOSPHO2Q8TCD6 241 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 NECAB3Q96P71 396 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 ZBED2Q9BTP6 218 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 SLKQ9H2G2 1235 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 MTIF3Q9H2K0 278 aaKnown RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 ZNF302Q9NR11 478 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 MAFBQ9Y5Q3 323 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-215ENST00000533946 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 KIAA1671Q9BY89 1806 aa10.93□□□□□ -0.66
SSBP3-215ENST00000533946 TTC3P53804 2025 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 CPLX1O14810 134 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 PSMD10O75832 226 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 CSPG5O95196 566 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 CD2BP2O95400 341 aaKnown RBP10.92□□□□□ -0.66
SSBP3-215ENST00000533946 FGFR4P22455 802 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 GNA11P29992 359 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 HTRA4P83105 476 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-215ENST00000533946 CRIPAKQ8N1N5 446 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 ATP8B4Q8TF62 1192 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 GTF3C6Q969F1 213 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 MBOAT7Q96N66 472 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 CEP89Q96ST8 783 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 IFIH1Q9BYX4 1025 aaKnown RBP10.92□□□□□ -0.66
SSBP3-215ENST00000533946 SH3GLB2Q9NR46 395 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 ORC3Q9UBD5 711 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-215ENST00000533946 GINS2Q9Y248 185 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 NOC2LQ9Y3T9 749 aaKnown RBP10.92□□□□□ -0.66
SSBP3-215ENST00000533946 PCDHA2Q9Y5H9 948 aa10.92□□□□□ -0.66
SSBP3-215ENST00000533946 CYP3A7-CYP3A51PA0A087WV96 503 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 GNAT1P11488 350 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms