RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SCRN1Q12765 414 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 LPIN1Q14693 890 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 KRT40Q6A162 431 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 TBCKQ8TEA7 893 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 ATP8B4Q8TF62 1192 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 GDPD5Q8WTR4 605 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 APBB2Q92870 758 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 TPCN1Q9ULQ1 816 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 KCNJ14Q9UNX9 436 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 GINS2Q9Y248 185 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 TTC3P53804 2025 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 CHD7Q9P2D1 2997 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 BRWD1Q9NSI6 2320 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-225ENST00000533704 LINC01553A4QN01 128 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 HBP1O60381 514 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 GAS7O60861 476 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 PSAPP07602 524 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 CIITAP33076 1130 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 SLC26A2P50443 739 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 AK2P54819 239 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 ANAPC15P60006 121 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 KRT76Q01546 638 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 GRB10Q13322 594 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 IER5Q5VY09 327 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 ZNF746Q6NUN9 644 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-225ENST00000533704 MTHFD1LQ6UB35 978 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 GJA10Q969M2 543 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 TGS1Q96RS0 853 aaKnown RBP11.82□□□□□ -0.52
CAPN1-225ENST00000533704 YME1L1Q96TA2 773 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 COL25A1Q9BXS0 654 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-225ENST00000533704 GABBR1Q9UBS5 961 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 INSL6Q9Y581 213 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 TRPV2Q9Y5S1 764 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 RALGAPA2Q2PPJ7 1873 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 MYO7AQ13402 2215 aa11.82□□□□□ -0.52
CAPN1-225ENST00000533704 IGKV6D-21A0A0A0MT36 114 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 WDR64B1ANS9 1081 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 MSH4O15457 936 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 PFKFB2O60825 505 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 TDP2O95551 362 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 KLRC1P26715 233 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 CD52P31358 61 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 USP11P51784 963 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-225ENST00000533704 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
CAPN1-225ENST00000533704 ANKRD1Q15327 319 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 RPAINQ86UA6 219 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 SMAP1Q8IYB5 467 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-225ENST00000533704 LENG9Q96B70 501 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 PPP1R16BQ96T49 567 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 TEKT3Q9BXF9 490 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 C22orf23Q9BZE7 217 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-225ENST00000533704 THEGQ9P2T0 379 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-225ENST00000533704 PCDHA10Q9Y5I2 948 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 MTCH2Q9Y6C9 303 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 EYSQ5T1H1 3165 aa11.81□□□□□ -0.52
CAPN1-225ENST00000533704 PRUNE2Q8WUY3 3088 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 COL1A2P08123 1366 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 TTC28Q96AY4 2481 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 UNC80Q8N2C7 3258 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 CCDC194A0A1B0GVG4 234 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 EDIL3O43854 480 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 EIF5BO60841 1220 aaKnown RBP11.8□□□□□ -0.52
CAPN1-225ENST00000533704 SEC24BO95487 1268 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 RPLP2P05387 115 aaKnown RBP11.8□□□□□ -0.52
CAPN1-225ENST00000533704 XBP1P17861 261 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 ATP4AP20648 1035 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 NEK4P51957 841 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 FOSBP53539 338 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 ERVK-21P61565 698 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 PAK2Q13177 524 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 INF2Q27J81 1249 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 ZNF484Q5JVG2 852 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 TSHZ1Q6ZSZ6 1077 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 KRT25Q7Z3Z0 450 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 METTL13Q8N6R0 699 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 TOP1MTQ969P6 601 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 CELF4Q9BZC1 486 aaKnown RBP11.8□□□□□ -0.52
CAPN1-225ENST00000533704 AGO3Q9H9G7 860 aaKnown RBP11.8□□□□□ -0.52
CAPN1-225ENST00000533704 DISC1Q9NRI5 854 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 GJB4Q9NTQ9 266 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 KIAA1671Q9BY89 1806 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 TRANK1O15050 2925 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 STK36Q9NRP7 1315 aa11.8□□□□□ -0.52
CAPN1-225ENST00000533704 NCOR1O75376 2440 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 SMIM35A0A1B0GVV1 85 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 LARGE1O95461 756 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 HTRA4P83105 476 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms