RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
COMMD9-208ENST00000533643 KCNH3Q9ULD8 1083 aa13.34□□□□□ -0.27
COMMD9-208ENST00000533643 KIAA1024Q9UPX6 916 aa13.34□□□□□ -0.27
COMMD9-208ENST00000533643 HPSEQ9Y251 543 aa13.34□□□□□ -0.27
COMMD9-208ENST00000533643 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
COMMD9-208ENST00000533643 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 HAS3O00219 553 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 POLR2DO15514 142 aaKnown RBP13.33□□□□□ -0.28
COMMD9-208ENST00000533643 DKC1O60832 514 aaKnown RBP eCLIP13.33□□□□□ -0.28
COMMD9-208ENST00000533643 F2P00734 622 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 PLCG1P19174 1290 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 MARK3P27448 753 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 GJA8P48165 433 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 PSEN2P49810 448 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 SLC26A2P50443 739 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 NDUFA8P51970 172 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 ACLYP53396 1101 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 KCNK18Q7Z418 384 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 PDILTQ8N807 584 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 NACC1Q96RE7 527 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 MTG1Q9BT17 334 aaPredicted RBP13.33□□□□□ -0.28
COMMD9-208ENST00000533643 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 CCDC39Q9UFE4 941 aa13.33□□□□□ -0.28
COMMD9-208ENST00000533643 TMEM150BA6NC51 233 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 E9PMD0 336 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 DNM1LO00429 736 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 OATP04181 439 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 XRCC6P12956 609 aaKnown RBP eCLIP13.32□□□□□ -0.28
COMMD9-208ENST00000533643 LIG1P18858 919 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
COMMD9-208ENST00000533643 MFSD10Q14728 455 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 E2F4Q16254 413 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 RRAGBQ5VZM2 374 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 ANO5Q75V66 913 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
COMMD9-208ENST00000533643 FMR1NBQ8N0W7 255 aaPredicted RBP13.32□□□□□ -0.28
COMMD9-208ENST00000533643 ENGASEQ8NFI3 743 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 ATP8B4Q8TF62 1192 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 FAM167AQ96KS9 214 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 NT5C3AQ9H0P0 336 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 NRBP2Q9NSY0 501 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 BLOC1S4Q9NUP1 217 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 ZNF215Q9UL58 517 aaPredicted RBP13.32□□□□□ -0.28
COMMD9-208ENST00000533643 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 DNM3Q9UQ16 869 aa13.32□□□□□ -0.28
COMMD9-208ENST00000533643 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
COMMD9-208ENST00000533643 SYKP43405 635 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 FAM160A1Q05DH4 1040 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
COMMD9-208ENST00000533643 KIAA0753Q2KHM9 967 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 IQUBQ8NA54 791 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 PPP1R13LQ8WUF5 828 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 BBXQ8WY36 941 aaPredicted RBP13.31□□□□□ -0.28
COMMD9-208ENST00000533643 RAD54LQ92698 747 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 NIFKQ9BYG3 293 aaKnown RBP13.31□□□□□ -0.28
COMMD9-208ENST00000533643 ANKEF1Q9NU02 776 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 DBR1Q9UK59 544 aaKnown RBP13.31□□□□□ -0.28
COMMD9-208ENST00000533643 FRMPD3Q5JV73 1810 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 GRIN2DO15399 1336 aa13.31□□□□□ -0.28
COMMD9-208ENST00000533643 A0A1W2PQ45 241 aaPredicted RBP13.3□□□□□ -0.28
COMMD9-208ENST00000533643 A0A1W2PQY0 241 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 ZBTB42B2RXF5 422 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
COMMD9-208ENST00000533643 HBP1O60381 514 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 NR1I2O75469 434 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 CABYRO75952 493 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 ZNF202O95125 648 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 EYA4O95677 639 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 SMIM10L2AP0DMW4 78 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 SMIM10L2BP0DMW5 78 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 INSRRP14616 1297 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 STAT6P42226 847 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 NPEPPSP55786 919 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 MCM6Q14566 821 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 LONRF3Q496Y0 759 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 DHX58Q96C10 678 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
COMMD9-208ENST00000533643 KATNAL1Q9BW62 490 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 BHMT2Q9H2M3 363 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 STK17AQ9UEE5 414 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
COMMD9-208ENST00000533643 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
COMMD9-208ENST00000533643 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms