RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 HAUS2Q9NVX0 235 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 C10orf71Q711Q0 1435 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 CCDC188H7C350 402 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 DNAJC8O75937 253 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-224ENST00000533129 EZRP15311 586 aaKnown RBP16.16■□□□□ 0.18
CAPN1-224ENST00000533129 GNA11P29992 359 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 SLC8A1P32418 973 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 NAPAP54920 295 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 IFI16Q16666 785 aaKnown RBP16.16■□□□□ 0.18
CAPN1-224ENST00000533129 ODF2Q5BJF6 829 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 DYMQ7RTS9 669 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 KDM4CQ9H3R0 1056 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 C6orf50Q9HD87 102 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 FBXL5Q9UKA1 691 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 TPX2Q9ULW0 747 aaKnown RBP16.16■□□□□ 0.18
CAPN1-224ENST00000533129 TMOD1P28289 359 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CHRNA5P30532 468 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.181e-6■■■□□ 14.6
CAPN1-224ENST00000533129 KLHL30Q0D2K2 578 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 MYOCDQ8IZQ8 938 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CEP63Q96MT8 703 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 PACSIN1Q9BY11 444 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 ROBO3Q96MS0 1386 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 G3V3G9 751 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 PGRMC1O00264 195 aaKnown RBP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 PDHBP11177 359 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 RAPGEF1Q13905 1077 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 ASIC2Q16515 512 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 DCAF8Q5TAQ9 597 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 RAD54LQ92698 747 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 MIEF2Q96C03 454 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 NEUROG2Q9H2A3 272 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CNOT10Q9H9A5 744 aaKnown RBP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CNOT8Q9UFF9 292 aaKnown RBP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 SWAP70Q9UH65 585 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 NAV1Q8NEY1 1877 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 SART1O43290 800 aaKnown RBP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 GNA14O95837 355 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 GCFC2P16383 781 aaKnown RBP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 ERCC3P19447 782 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 MARSP56192 900 aaKnown RBP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 NBPF9Q3BBW0 867 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 C12orf60Q5U649 245 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CC2D2BQ6DHV5 1058 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 PODNQ7Z5L7 613 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CEP57Q86XR8 500 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 UBLCP1Q8WVY7 318 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-224ENST00000533129 CCT6BQ92526 530 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 MTMR9Q96QG7 549 aa16.15■□□□□ 0.18
CAPN1-224ENST00000533129 MYH7BA7E2Y1 1941 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 CEP104O60308 925 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 TXKP42681 527 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 DDX42Q86XP3 938 aaKnown RBP eCLIP16.14■□□□□ 0.17
CAPN1-224ENST00000533129 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.14■□□□□ 0.172e-7■■■□□ 16.5
CAPN1-224ENST00000533129 ATP6V0A4Q9HBG4 840 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
CAPN1-224ENST00000533129 NOVA2Q9UNW9 492 aaKnown RBP16.14■□□□□ 0.17
CAPN1-224ENST00000533129 SLX4Q8IY92 1834 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 SMCO2A6NFE2 343 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 MGRN1O60291 552 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 USP17L8P0C7I0 530 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 DOK7Q18PE1 504 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 TMEM266Q2M3C6 531 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 TMC3Q7Z5M5 1100 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 TRIM59Q8IWR1 403 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 LRRC57Q8N9N7 239 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 BANK1Q8NDB2 785 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 TBCKQ8TEA7 893 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 SEC14L1Q92503 715 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 DDX12PQ92771 950 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 CENPTQ96BT3 561 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 SLITRK6Q9H5Y7 841 aa16.14■□□□□ 0.17
CAPN1-224ENST00000533129 ATP8B3O60423 1300 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 TRAF5O00463 557 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 ZBTB48P10074 688 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-224ENST00000533129 DRD4P21917 467 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 SEPT2Q15019 361 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 LRRC41Q15345 812 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 SPDYCQ5MJ68 293 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 FAM133AQ8N9E0 248 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 HVCN1Q96D96 273 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 PSMD1Q99460 953 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 RAB34Q9BZG1 259 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 NOC2LQ9Y3T9 749 aaKnown RBP16.13■□□□□ 0.17
CAPN1-224ENST00000533129 CLGNO14967 610 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 MAGOHP61326 146 aaKnown RBP16.13■□□□□ 0.17
CAPN1-224ENST00000533129 CALCRLQ16602 461 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 CPLX4Q7Z7G2 160 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 GLIS3Q8NEA6 775 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 C7orf43Q8WVR3 580 aa16.13■□□□□ 0.17
CAPN1-224ENST00000533129 MAGOHBQ96A72 148 aaKnown RBP16.13■□□□□ 0.17
CAPN1-224ENST00000533129 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms