RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PSMC6P62333 389 aa20.6■□□□□ 0.89
SMPD1-208ENST00000533123 DHX8Q14562 1220 aaKnown RBP20.6■□□□□ 0.89
SMPD1-208ENST00000533123 ZNF830Q96NB3 372 aaPredicted RBP20.6■□□□□ 0.89
SMPD1-208ENST00000533123 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.6■□□□□ 0.89
SMPD1-208ENST00000533123 BRCA2P51587 3418 aa20.6■□□□□ 0.89
SMPD1-208ENST00000533123 ADCY6O43306 1168 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 P4HBP07237 508 aaKnown RBP20.59■□□□□ 0.89
SMPD1-208ENST00000533123 ABHD15Q6UXT9 468 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 FANCLQ9NW38 375 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 DACH1Q9UI36 760 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 ZBTB39O15060 712 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 GNRH1P01148 92 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 UGCGQ16739 394 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 IQSEC1Q6DN90 963 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 KLHL10Q6JEL2 608 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 SWSAP1Q6NVH7 229 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 RDM1Q8NG50 284 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 SPATA33Q96N06 139 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 CUEDC2Q9H467 287 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 STK17AQ9UEE5 414 aa20.59■□□□□ 0.89
SMPD1-208ENST00000533123 GSTTP1A0A1W2PQM5 241 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 SLC26A4O43511 780 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 PSAPP07602 524 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 QARSP47897 775 aaKnown RBP20.58■□□□□ 0.89
SMPD1-208ENST00000533123 TPM4P67936 248 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 TNFAIP2Q03169 654 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 ARHGAP1Q07960 439 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 TRIM32Q13049 653 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 IRF5Q13568 498 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 MCM6Q14566 821 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 DUSP28Q4G0W2 176 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 HSP90AA4PQ58FG1 418 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 MFSD14CQ5VZR4 134 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 TRMT1LQ7Z2T5 733 aaKnown RBP20.58■□□□□ 0.89
SMPD1-208ENST00000533123 ZSCAN30Q86W11 494 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 CCDC60Q8IWA6 550 aaPredicted RBP20.58■□□□□ 0.89
SMPD1-208ENST00000533123 DRC7Q8IY82 874 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 RAET1EQ8TD07 263 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 NEK9Q8TD19 979 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 PIGOQ8TEQ8 1089 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 LARP4BQ92615 738 aaKnown RBP20.58■□□□□ 0.89
SMPD1-208ENST00000533123 RAD54LQ92698 747 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 GABBR1Q9UBS5 961 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 CASP8AP2Q9UKL3 1982 aa20.58■□□□□ 0.89
SMPD1-208ENST00000533123 PPP1R3GB7ZBB8 358 aa20.58■□□□□ 0.88
SMPD1-208ENST00000533123 NOP56O00567 594 aaKnown RBP20.58■□□□□ 0.88
SMPD1-208ENST00000533123 ATG7O95352 703 aa20.58■□□□□ 0.88
SMPD1-208ENST00000533123 MIS18BP1Q6P0N0 1132 aa20.58■□□□□ 0.88
SMPD1-208ENST00000533123 NRBP1Q9UHY1 535 aa20.58■□□□□ 0.88
SMPD1-208ENST00000533123 DNM3Q9UQ16 869 aa20.58■□□□□ 0.88
SMPD1-208ENST00000533123 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.58■□□□□ 0.88
SMPD1-208ENST00000533123 BACH1O14867 736 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 KLRC4O43908 158 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 GH1P01241 217 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 SUPT20HL2P0C7V6 817 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 ARHGEF6Q15052 776 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-208ENST00000533123 TRPV1Q8NER1 839 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 SEPT1Q8WYJ6 367 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 MRFAP1L1Q96HT8 127 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 GPR20Q99678 358 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 ZSWIM4Q9H7M6 989 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 MAGEF1Q9HAY2 307 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 IFNKQ9P0W0 207 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 GDAQ9Y2T3 454 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 NFE2L3Q9Y4A8 694 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 ADCY3O60266 1144 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 TCF7P36402 384 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-208ENST00000533123 LAMC2Q13753 1193 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 GLIPR1L2Q4G1C9 344 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 LENG1Q96BZ8 264 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-208ENST00000533123 TRIM17Q9Y577 477 aa20.57■□□□□ 0.88
SMPD1-208ENST00000533123 WDR81Q562E7 1941 aa20.56■□□□□ 0.88
SMPD1-208ENST00000533123 SSBP05455 408 aaKnown RBP eCLIP20.56■□□□□ 0.88
SMPD1-208ENST00000533123 STX17P56962 302 aa20.56■□□□□ 0.88
SMPD1-208ENST00000533123 PSMC5P62195 406 aa20.56■□□□□ 0.88
SMPD1-208ENST00000533123 KMT5BQ4FZB7 885 aa20.56■□□□□ 0.88
SMPD1-208ENST00000533123 SV2BQ7L1I2 683 aa20.56■□□□□ 0.88
SMPD1-208ENST00000533123 ENOX1Q8TC92 643 aaKnown RBP20.56■□□□□ 0.88
SMPD1-208ENST00000533123 TRIM9Q9C026 710 aa20.56■□□□□ 0.88
SMPD1-208ENST00000533123 XPO4Q9C0E2 1151 aaKnown RBP20.56■□□□□ 0.88
SMPD1-208ENST00000533123 RMND1Q9NWS8 449 aa20.56■□□□□ 0.88
SMPD1-208ENST00000533123 PLA2G4BP0C869 781 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 ERCC5P28715 1186 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-208ENST00000533123 CDC25BP30305 580 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 ZNF658Q5TYW1 1059 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-208ENST00000533123 NACC1Q96RE7 527 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 BHMT2Q9H2M3 363 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 ZKSCAN5Q9Y2L8 839 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 MYL1P05976 194 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 CYBAP13498 195 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 MUTP22033 750 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 FANCCQ00597 558 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 CACNB2Q08289 660 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-208ENST00000533123 AFG1LQ8WV93 481 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 PCYT2Q99447 389 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 FAM184BQ9ULE4 1060 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 CTNND2Q9UQB3 1225 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 MAPK8IP1Q9UQF2 711 aa20.55■□□□□ 0.88
SMPD1-208ENST00000533123 GNEQ9Y223 722 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms